Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0627 ATGGGAAAGATATACCCTGATGAGATTGAGGAACCCAGCATGTGCAGTAAAAGAGAAACTTACACAGTATGGATGAAATCACTCGTGTTCCACTCTAATGGCTGCACCGTCTACAACTCCACTGGCGACATCGTTTATCGAGTCGATAACTACGACTCAAAGGCCACCAGAGAAGTGAACCTCATGGATCTCCGAGGCACAGTTCTCTGTACCATGCATAAGAGAAAACTAGGGTTTGGATGTTGGGAAGGAAGGAGGAAGGAGAAGAGGTGGTTCCAGGTGAAAAGATGCATGAAGGGAAAAGGAGAATGTGAAATGAGAGTAGGGAGCCAAAAGTACAGGATAGTTGGAATCGGAAGAAGCAAAGCAGCGTTTGGGATAATAAACATGGATGGACAAATTGTTGCAGAGGTAAAGCAGAAGGAATCGTGGTCGGGAGTAGTGCTGGGGGATGATGTGGTAACAATGGAAGTGGAGGCCAACACGGATCATTCACTCATGATGGCTTTCGTCATTGTCTATGGATTAATCCGAGGAAGAATGTAG 546 0.4579 MGKIYPDEIEEPSMCSKRETYTVWMKSLVFHSNGCTVYNSTGDIVYRVDNYDSKATREVNLMDLRGTVLCTMHKRKLGFGCWEGRRKEKRWFQVKRCMKGKGECEMRVGSQKYRIVGIGRSKAAFGIINMDGQIVAEVKQKESWSGVVLGDDVVTMEVEANTDHSLMMAFVIVYGLIRGRM 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0627 181 PANTHER - 19 177 IPR007612 -
Lele49g0627 181 Pfam LURP-one-related 11 173 IPR007612 -
Lele49g0627 181 Gene3D - 9 180 IPR038595 -
Lele49g0627 181 SUPERFAMILY Tubby C-terminal domain-like 13 177 IPR025659 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0627 Lele-ChrLele49 3805774 3806500 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g0627 49 3805774 3806500 Lele49g0627 49 3805774 3806500 ECH
Lele49g0627 49 3805774 3806500 Lele51g0647 51 3910311 3911438 hybridization
Lele49g0627 49 3805774 3806500 Lele52g0648 52 4110947 4111588 hybridization