Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0517 ATGGATGTGCCCAAACTACAATATGAAGCCGTCATCACCGTCCCTCCACTGAAGATAGCAGTTCCTAGGCGAGTTCGCCGAGTTTTGGTGACTGATCCCAAAATCGACGACGCCGGAAAGTTTCGTGGGTGCTACCAGGTGGTTATGTACTATGAGAATGGGAACCAGGAGGGCTTTGGATGGCTTCTTGCTGGGTGGATCGTGGAGTCTCTGGGCTTAGCTCTATCGGAGAACCCGTTGCTCGCCGGCCGTCTTCAGAAGAAGGCGGAAGCAGAGGGTGGTGACACGGAAATGGAGATTGTGTCTAATGATTGTGGCATTCGAATGGCGGAGGCTCGAATCTCCATTGCTCTCTCAGACTTCCTTGAATCCGGTGAAAAGCATAATCTTGAGCACGAGCTGGTCTTCTGGAAGGATATCGACGAGCAGAGTCCTGAGTTCTCACCTCTGTTTTATGTGACCAACTTCGAATGTGGAGGGTATTCAATCGGCATTAGCTGCAGTCTGCTGCTGGCAGATTTTCTGGTGGTTGATAATTTCCTGAAGAAATGGGCAGACATACACAAGAACCAAGTACCACGTAATGGAGAGACAATAACACCTTTATTTTACCATCCTCGTCTGAAAAATCCCGAGGCTCCTCCCCAAGACATAATTCGTCGTACGCCATACAAAAACGGTGGTCAAAGCTTATTGTTCAAGATCGCTTCTCAAGACTCCGAGTTTGTGAGCGAATCAGCTAGGCTGTGTGTTCAGGAGGCAGAGAAAAAGCTCCACAGGAAAATGGGGTCGTCGGAGTTTTCTTTGTTCGTGAGAGAATCGTCTGAGGTTGTGAAGGTGGAGACTTGTGAACTTAGTAGGAAGGTGCTGGGCCTCAAGGATGAAATGATGAGTATTACAACATGGGATGAGTTTGGCGTGTACGACATATCGTTTCACGAAGAGAAGAGGCCTGTGCATGTGTCTCGTTGGATTGGATCGGCTTCTGAAGGGAATGTTATGGCGGTCAAATATCCAGAGGAGGGTGTCTCTGCGGTGGTTTTAGTTACACTTGCTGCTGAAAGGGAAAACGGAACTCTGAATTGA 1086 0.4853 MDVPKLQYEAVITVPPLKIAVPRRVRRVLVTDPKIDDAGKFRGCYQVVMYYENGNQEGFGWLLAGWIVESLGLALSENPLLAGRLQKKAEAEGGDTEMEIVSNDCGIRMAEARISIALSDFLESGEKHNLEHELVFWKDIDEQSPEFSPLFYVTNFECGGYSIGISCSLLLADFLVVDNFLKKWADIHKNQVPRNGETITPLFYHPRLKNPEAPPQDIIRRTPYKNGGQSLLFKIASQDSEFVSESARLCVQEAEKKLHRKMGSSEFSLFVRESSEVVKVETCELSRKVLGLKDEMMSITTWDEFGVYDISFHEEKRPVHVSRWIGSASEGNVMAVKYPEEGVSAVVLVTLAAERENGTLN 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0517 361 Pfam Transferase family 69 217 - -
Lele52g0517 361 Gene3D - 33 225 IPR023213 -
Lele52g0517 361 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 35 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0517 Lele-ChrLele52 3147181 3148361 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g0517 79 185 Acyl Lipid Metabolism Gene Families AT3G23840 27.523 7.27e-08 52.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g0483 49 2879876 2881106 Lele52g0517 52 3147181 3148361 hybridization
Lele50g0515 50 3072988 3078837 Lele52g0517 52 3147181 3148361 hybridization