Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0515 ATGAGGCTCAGATGTCGGAGCCAACGAATCAACGGGGACGACTGGGAAGGCGTGTCAAGAGATCCTAAGGCTTGCCACGTGTCCTACGCTATGCTTCCATTCCATTTCCGAATTGGTCGTAACTATTTAGAGGCACGATATGCCCCCACGGAGCATTCTGCTCTACAATTGGGTGCTCAGAAAGGGAGGGAAAACACCAGGCAGTGGCTAGGAAGAAAAGGAAGCGCACGACCCGAAGCATTGGTAAGTGAGGAGGGTCGTAGTTACCACGAACTCGAACATGCGGTGTCAGGCCTACCTGGAAGGTTAAGAATAAAGAAGGTGGCTTTCATTAGGGCCACGTATGGTTACGATGATTGGGACCTCCAGCTGGGATTGCCGTCGCTGAAAGAGATGAACAGATTGGGGCGGGCTCGCGGAGTCTCAGTCTTATCGTCCTCATCGGTGTATTCGAATTTCAAACCCACAGTTGACGCTGATCAAGACCTCCCCACATACGATCCTCGCTCCCACGTTGCTCAGAAGGAGCTCTCTCGTCTCAGATCTGCCCAGAACGCAATCCACATCATCCCCCTTCTCCTACTTCTCTGCGCTCTCATCCTCTGGTTTTTCTCCACTGCAGATTTGCAGTGTCACCCTTGACAACACCAATCCCACACCCAACCCTGCGGAGAGGCAGAAGCAAAAATGGATGTGCCCAAACTACAATATGAAGCCGTCATCACCGTCCCTCCACTGAAGATAACAGTTCCTAGGCTAGTTCGCAGAGTTTTGGTGACTGATCCCAAAATCGACGACGCCGGAAAGTTTCGTGGGTGCTACCAGGTGGTTATGTACTATGAGAATGTGAACCAGGAGAGCTTTGGATGGCTTCTTGCTGGGTGGATCGTTGAGTCTCTGGGCTTAGCTCTATCGGAGAACCCGATGCTCGCTGGCCGGCTTCAGAAGAAGGCGGAAGCAGAGGGTGGTGACACGGAAATGGAGATTGTGTCTAATGATTGTGGCATTCGAATGGCGGAGGCTCGAATCTCCATTGCTCTCTCAGACTTCCTTGAATCCGGTGAAAAGCATAAGCTTGAGCACGAGCTTGTCTTCTGGAAGGATATCGACGAGCAGAGTCCTGAGTTCTCACCTCTGTTTTATGTGACCAACTTCGAATGTGGAGGGTATTCAATCGGCATTAGCTGCAGTCTGCTGCTGGCAGATTTTCTGGTGGTTGATAATTTCCTGAAGAAATGGGCAGACATACACAAAAACCAAGTACCACGTAATGGGGAGACAAGAACACCTTTATTTTACCATCCTCGTCTGAAAAATCCCGAGGCTCCTCCCCCGGACATAATTCGTCGTACGCCATACAAAAACGGTGGGCAAAGCTTGTTGTTCAAGATCGCTTCTCAAGACTCCGAGTTTGAGAGCGAATCAGCTCGGCTGTGTGTTCAGGAGGCCGAGAAAAAGCTCCACAGAAAAATGGGGTCGTCGGAGTTTTCTTTGTTCGTGAGAGAACAGTCTGAGGTTGTGAAGGTAGAGACTTGTGAACTTAGGAGGAGGGTGCTGGGCCTCAAGAATGAAATGATGAGTATTACAACATGGGATGAGTTTGGAGTGTACGACATATCGTTTCACGAAGAGAAGAGGCCTGTGCATGTGTCTCGTTGGATTGGATCGGCTTCTGAAGGGAATGTTATGGCGGTCAAATATCCAGAGGAGGGTGTCTCTGCAGTGGTTTTAGTTACACTTGCTGCTGAAAGTGAGAACGGAACTCTGAATTGA 1773 0.4997 MRLRCRSQRINGDDWEGVSRDPKACHVSYAMLPFHFRIGRNYLEARYAPTEHSALQLGAQKGRENTRQWLGRKGSARPEALVSEEGRSYHELEHAVSGLPGRLRIKKVAFIRATYGYDDWDLQLGLPSLKEMNRLGRARGVSVLSSSSVYSNFKPTVDADQDLPTYDPRSHVAQKELSRLRSAQNAIHIIPLLLLLCALILWFFSTADLQCHPXQHQSHTQPCGEAEAKMDVPKLQYEAVITVPPLKITVPRLVRRVLVTDPKIDDAGKFRGCYQVVMYYENVNQESFGWLLAGWIVESLGLALSENPMLAGRLQKKAEAEGGDTEMEIVSNDCGIRMAEARISIALSDFLESGEKHKLEHELVFWKDIDEQSPEFSPLFYVTNFECGGYSIGISCSLLLADFLVVDNFLKKWADIHKNQVPRNGETRTPLFYHPRLKNPEAPPPDIIRRTPYKNGGQSLLFKIASQDSEFESESARLCVQEAEKKLHRKMGSSEFSLFVREQSEVVKVETCELRRRVLGLKNEMMSITTWDEFGVYDISFHEEKRPVHVSRWIGSASEGNVMAVKYPEEGVSAVVLVTLAAESENGTLN 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0515 590 Pfam Transferase family 278 444 - -
Lele50g0515 590 Gene3D - 261 454 IPR023213 -
Lele50g0515 590 PANTHER TRANSMEMBRANE PROTEIN 145 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0515 Lele-ChrLele50 3072988 3078837 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g0515 308 414 Acyl Lipid Metabolism Gene Families AT3G23840 27.523 9.46e-07 49.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele50g0515 50 3072988 3078837 Lele51g0499 51 2929513 2931669 hybridization
Lele50g0515 50 3072988 3078837 Lele52g0517 52 3147181 3148361 hybridization