Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0496 ATGAGAATCTTGTCAAGCTATTTCCATTCCCTCTCCCAAACTCCTCACAGGCTCAGAAAAAGAATGCTTGCCACTTGGACACCAGACCAAGAACTCAACCAAGTGAGGCTCAGGTCTGGTTCAGAAATGAGGAGGAAGCTCAAGTGGTATGATCTGGTATCTCTTGGTGTAGGAGGAATGCTTGGTGTTGGAGTCTTTGTTACAACTGGTTCTGTGGCACTCCATCACTCTGGTTCCTCTGTTTTCATATCATATATCATAGCCGGAATATCAGCACTTCTCTCCTCTTTTTGTTATACTGAATTTTCTGTTCAAGTCCCTGTTGCAGGAGGAGCTTTCAGTTATTTAAGATTAACATTTGGAGAATTTATGGGGTATTTTGCTGGGGCAAATATACTAATGGAGTATGTATTGTCCAACGCCGCGGTGGCGAGGAATTTTACAGAGTATTTGACCTATGCATTTGGGAAAAATGATCCAAATTTGTGGAGAGTGCAAGTTCATGGATTGCTAAAGGACTATAACATGCTGGATTTTCCAGCTGTGGCTATTGTTCTTCTTCTCACTCTATGCTTGTGTCATAGTACCAAGGAAAGCTCCATATTGAACCTCATTATGACAGTCTTCCATGTGATTTTCTTTGGATTCATCATAGTAGCTGGTTTCTACAATGGAAGTGCAAAGAACTTGGTAAGTCCAAAAGGAATAGCTCCGTTTGGTGTTCGAGGTGTTCTTGATGGAGCAGCTATAGTCTACTTCAGCTACATAGGCTATGACTCAGCTTCAACCATGGCCGAAGAGATAAAAGATCCTTCTAAAAGCCTTCCAATCGGCATTATTGGCTCAGTTCTTATAACAACAGTGATTTATTGCCTAATGGCTTTGTCACTGTGTGCCATGGTTCCTTACAACAAGATTTCAGAGAAAGCATCATTTTCTGTGGCTTTTCTTGATATTGGTTGGAACTGGGCAAGCAACCTTGTAGGAGGAGGTGCTAGTTTGGGAATAATGGCTTCTCTACTGGTAGCCATGTTAGGTCAAGCCAGATACCTTTGTGTTCTTGGAAGGGCTAGGCTGGTCCCATCCTGGTTAGCTAAAGTGCACCCTTCCACTGGCACTCCATTGAATGCCACTCTCTTTCTTGGACTATGCACAGCATCTATAGCACTGTTCACGGAGCTGGACATAATAGTTGAGATGGTGAGCATAGGCACTCTACTGAAACTTCTCTCCTTCCAACGGTTTGCTATATGGTCTTGTCTCATTACAATCTTCTATGTCCTCTATGGGGTTCACTCCACTTATCAAGCAGAAGAGACTGAGATTGGTGTTAACGAACCAAGCACAAACAGTTTACAATCAAAGAAGTTTGAGGCAAGTATACGCCGGGAGAATGGTGTATTTGAATCTTTGATCAGGCAGAAATCTATGATGATGATTCTAGTTGACCAGGTCATAGTGGACATGAGAGAGTTCATGAGCAGCCTTCCTAATGTTCTTCATCAAAAGGGAATGCGCATTATTCCAGTGAACCTAGAAGTTGGTGACTATATTCTCTCACCATTCATTTGTGTGGAAAGAAAAAGTATCCAAGATCTCTTTATGAGCCTCACATCAGGACGTCTTTATCACCAGGTGGAGACAATGGTGCGATATTATAGGAGCTTCTCATTCCAGTTGTCCTTGCTTGCTTTACACTTTCCCCGGCTACGAATAATATGGTCTCGGAGCTTGCATGCTACTGCTGCAATATTCGCGTCACTGAAGGCAAATCAAGATGAACCAGATGAAACAAAAGCAATGAGATTGGGTGTCCCCTCAGAAGGAATTGTGGACGATGATGTGAGATTCAAACTACAGGACCATAATGGAAGGACGCATGAGCTTGGTTTAGCTTGCTCTTCTTCCTGTGGAGAAGCTGGCCAAACAAATGGGTGATTCTCAGTGTCATTTTTATTTTAG 1962 0.4271 MRILSSYFHSLSQTPHRLRKRMLATWTPDQELNQVRLRSGSEMRRKLKWYDLVSLGVGGMLGVGVFVTTGSVALHHSGSSVFISYIIAGISALLSSFCYTEFSVQVPVAGGAFSYLRLTFGEFMGYFAGANILMEYVLSNAAVARNFTEYLTYAFGKNDPNLWRVQVHGLLKDYNMLDFPAVAIVLLLTLCLCHSTKESSILNLIMTVFHVIFFGFIIVAGFYNGSAKNLVSPKGIAPFGVRGVLDGAAIVYFSYIGYDSASTMAEEIKDPSKSLPIGIIGSVLITTVIYCLMALSLCAMVPYNKISEKASFSVAFLDIGWNWASNLVGGGASLGIMASLLVAMLGQARYLCVLGRARLVPSWLAKVHPSTGTPLNATLFLGLCTASIALFTELDIIVEMVSIGTLLKLLSFQRFAIWSCLITIFYVLYGVHSTYQAEETEIGVNEPSTNSLQSKKFEASIRRENGVFESLIRQKSMMMILVDQVIVDMREFMSSLPNVLHQKGMRIIPVNLEVGDYILSPFICVERKSIQDLFMSLTSGRLYHQVETMVRYYRSFSFQLSLLALHFPRLRIIWSRSLHATAAIFASLKANQDEPDETKAMRLGVPSEGIVDDDVRFKLQDHNGRTHELGLACSSSCGEAGQTNGXFSVSFLF 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0496 653 Pfam Amino acid permease 47 407 IPR002293 GO:0016020|GO:0022857|GO:0055085
Lele52g0496 653 Gene3D - 484 600 - -
Lele52g0496 653 SUPERFAMILY Restriction endonuclease-like 485 594 IPR011335 -
Lele52g0496 653 Pfam ERCC4 domain 487 555 IPR006166 GO:0003677|GO:0004518
Lele52g0496 653 SMART ERCC4_2 484 563 IPR006166 GO:0003677|GO:0004518
Lele52g0496 653 Gene3D Amino acid/polyamine transporter I 42 442 - -
Lele52g0496 653 PANTHER INNER MEMBRANE TRANSPORTER YGJI-RELATED 26 408 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0496 Lele-ChrLele52 3004747 3010665 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g0496 6 407 Organic Solute Cotransporters AT2G34960 42.786 6.72e-107 333
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g0459 49 2765427 2767758 Lele52g0496 52 3004747 3010665 hybridization
Lele50g0496 50 2937981 2940295 Lele52g0496 52 3004747 3010665 hybridization