Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0496 ATGGATGATATCCACACTGCAAACAACAACAGCATGAGAATCTTGTCAAGCTATTTCCATTCCCTCTCCCAAACTCCTCACAGGCTCAGAAAAAGAATGCTTGCCACTTGGACACCAGACCAAGAACTCAACCAAGTGAGGCTCAGGTCTGGTTCAGAAATGAGGAGGAAGCTCAAGTGGTATGATCTGGTATCTCTTGGTGTAGGAGGAATGCTTGGTGTTGGAGTCTTTGTTACAACCGGTTCTGTGGCACTCCATCACTCTGGTTCCTCTGTTTTCATATCATATATCATAGCCGGAATATCAGCACTTCTCTCATCTTTTTGTTATACTGAATTTTCTGTCCAAGTCCCTGTTGCAGGAGGAGCATTCAGTTATTTAAGATTAACATTTGGAGAATTTGTGGGGTACTTTGCTGGGGCAAATATACTGATGGAGTATGTATTGTCCAACGCCGCGGTGGCGAGGAATTTTACAGAGTATTTGACCTATGCATTTGGGAAAAATGATCCAAATTTGTGGAGAGTGGAAGTTCACGGATTGCCAAAGGACTATAACATGCTGGATTTTCCAGCTGTGGCTATTGTTCTTCTTCTCACTCTATGCTTGTGTCATAGTACCAAAGAAAGCTCCATATTGAACCTCATTATGACAGTCTTCCATGTGATTTTCTTTGGATTCATCGTAGTAGCTGGTTTCTACAATGGAAGTGCAAAGAACTTGGTAAGTCCAAAAGGAATAGCTCCGTTTGGTGTTCGAGGTGTTCTTGATGGAGCAGCTATAGTCTACTTCAGCTACATAGGCTATGACTCAGCTTCAACCATGGCCGAAGAGATAAAAGATCCTTCTAAAAGCCTTCCAATCGGCATAATTGGCTCAGTTCTTATAACAACAGTGATTTATTGCCTAATGGCTTTGTCACTGTGTGCCATGGTTCCTTACAACAAGATTTCAGAGAAAGCATCATTTTCTGTGGCTTTCCTTGATATTGGTTGGAACTGGGCAAGCAACCTTGTAGGAGGAGGTGCTAGTTTGGGAATAATGGCTTCTCTACTGGTAGCCATGTTAGGTCAAGCCAGATACCTTTGTGTTCTTGGAAGAGCTAGGCTTGTCCCATCCTGGTTAGCTAAAGTGCACCCTTCAACTGGCACTCCCTTGAATGCCACTCTCTTTCTGGGACTATGCACAGCATCTATAGCACTGTTCACGGAGCTGGACATAATAGTTGAGATGGTGAGCATAGGCACTCTGTTAGTGTTCTACTTGGTGGCCAATGCTCTTATATATCGCAGATATGTAATTACAAGCCGTGCCCCACCACTTAAAACTCTCTTGTTCCTCTTCCTCCTCTCTGCAACTTCACTTGGCTTCTCTATTTCTTGGAAGTTCAAGCAACAATGGTGGGGTCTTCCTCTGTTTGGTGGCTTCATGATTACCATCACAGGCTTCTTCCAAAACACAGTGCCTTACCTTCCCCAACCGGACTGGTCTGTGCCGTTCATGCCATGGCCTGCAGCTATCTCCATCTTTCTCAACATTTTCCTCATGACAACACTGAAACTTCTCTCCTTCCAACGGTTTGCTATATGGTCTTGTCTCATTACAATCTTCTATGTCCTCTATGGGGTTCACTCCACTTATCAAGCAGAAGAGACTGAGATTGGTGTTAACGAACCAAGTACAAACAGTTTACAATCAAAGGTAGAATTGCAAGTGCTTTAG 1722 0.4361 MDDIHTANNNSMRILSSYFHSLSQTPHRLRKRMLATWTPDQELNQVRLRSGSEMRRKLKWYDLVSLGVGGMLGVGVFVTTGSVALHHSGSSVFISYIIAGISALLSSFCYTEFSVQVPVAGGAFSYLRLTFGEFVGYFAGANILMEYVLSNAAVARNFTEYLTYAFGKNDPNLWRVEVHGLPKDYNMLDFPAVAIVLLLTLCLCHSTKESSILNLIMTVFHVIFFGFIVVAGFYNGSAKNLVSPKGIAPFGVRGVLDGAAIVYFSYIGYDSASTMAEEIKDPSKSLPIGIIGSVLITTVIYCLMALSLCAMVPYNKISEKASFSVAFLDIGWNWASNLVGGGASLGIMASLLVAMLGQARYLCVLGRARLVPSWLAKVHPSTGTPLNATLFLGLCTASIALFTELDIIVEMVSIGTLLVFYLVANALIYRRYVITSRAPPLKTLLFLFLLSATSLGFSISWKFKQQWWGLPLFGGFMITITGFFQNTVPYLPQPDWSVPFMPWPAAISIFLNIFLMTTLKLLSFQRFAIWSCLITIFYVLYGVHSTYQAEETEIGVNEPSTNSLQSKVELQVL 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0496 573 Gene3D Amino acid/polyamine transporter I 53 489 - -
Lele50g0496 573 Pfam C-terminus of AA_permease 496 545 IPR029485 -
Lele50g0496 573 Pfam Amino acid permease 58 474 IPR002293 GO:0016020|GO:0022857|GO:0055085
Lele50g0496 573 PANTHER INNER MEMBRANE TRANSPORTER YGJI-RELATED 33 546 - -
Lele50g0496 573 PIRSF AA_transporter 485 567 - -
Lele50g0496 573 PIRSF AA_transporter 36 492 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0496 Lele-ChrLele50 2937981 2940295 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g0496 145 550 Organic Solute Cotransporters AT3G10600 50.718 7.55e-138 405
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele50g0496 50 2937981 2940295 Lele51g0477 51 2809649 2812011 hybridization
Lele50g0496 50 2937981 2940295 Lele52g0496 52 3004747 3010665 hybridization