Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0227 ATGGGGCTTGACGGGGTCCGAGAAAATAAAATGGTGGGACTGAGATTGGCTCAAACTCTCAAGCGTTCAAAGAGTTTTCCTGATAAGAAGAAAGTCGAGGAGGATAATCCAGATAATCACATCGAGGCCTCAGATCGAACGAAGCTGGATATCGGGTACCTCACAGATTGTACAAAATCTACGAGAAAACAAAACCCTGCAAGTGAAGTCCAAAATAATCTAAAGCAAGAGATTCTAGAACTTGAGAGAAGGTTACAACACCAATTTGAGGTGCGATGCACATTGGAAAAGGCTCGTGGATACAGGGCTTCATCTCTTCAAAATTCTAATGACTTGATAATACCCAAGCCGGCTACAGAATTAATCAAGGAAATTGCACTGTTAGAGCTGGAAGTTGTATATCTGGAACAACATCTTCTCTCCTTGTACCGTAAAGCATTCGATCAACAATTATCTTCCGTATCTCCATCTACCAAGGAGGAAAAAGTAGAAGCTTCCCCAGTAACACCTAAGGCAAGAGTCATTGAAGTTTCCGATGTTGAGATCTTATCCAAAAGAGGATGTTCTGCCACGCAACCTGATAGTCATAAGCTTGAGACTCCAGGAAAGGAATATAGTATACAATCTAATGGACGTGAGCCAGATGCCCATGGAAAAGAACATAATGGAAGTGGACTAGAAAAGCTATTAGATTCCGGTGTGTATCGTTGTCATTCCTCGTTATCACAGTATTCAGCATTTGCAACTAGAACCTCTCCTCCAGCAAAACCTCTAGATAAATCTTTGCGAGCTTGTCACTCACAACCGTTGTCCATGATGGAGGTAAATCAACTTTTGTGGAATATGTCCTACATAGTATTGCTTTATCATGCTCTTGTATTTGCATTTACAATAAGTTCTATAATTAATCTTTCTGGCAGCCTTTTTGTGGTTTTGACTTTTAGTGATCTTGTGCAGTATGCCCAATCTGCATCATCGAATGTGATCAGTCTGGCAGAACATCTTGGCACTCGCATATCTGATCATATTCCGGATACACCTAATAGGCTTTCTGAAGAAATGGTCAAATGCATATCAGCTATATATTGCAAACTTTCAGACCCGTCTTTGACGCAACCCGGCCTTTCATCCCCAAGTTCATCCATGTCATCAATGAGCGGCTTCTCTCTGGGAGATCAAGGTGATATATGGAGTCCGGGGTTCAAGAATAATTCCTCCTTCGATGTACGGTTAGACAACCCTTTCCATGTTGGAGGACTCAAGGAGTTCAGTGGACCGTACAGCACCATGGTTGAAGTATCATGGATTTATAGAGAGAGTCAGAAGTTGGGTGACACGGAGCTGCTGCTCCAGAATTTCAGGTCGCTTATCTGTCAATTGGAAGATATGAATCCGGGGAAGTTGAATCATGAGGAGAAGCTAGCTTTTTGGATCAACATACACAATGCTTTGGTGATGCATGCATTTTTGGCGTATGGGATTCCACAGAACAATGTGAAGAGACTATTTCTTCTCTTGAAGGCTGCATACAATGTTGGGGGTCAGACTGTTAGTGCAGACACAATACAAAGGTCCATCCTCGGATGCCGACTCTCTCGTCCCGGACAGTGGCTTCGGGTGTTCTTCTCCACAAGGACAAAATTCAAGGCTGGAGATGGACGGCAATCTTATGCAATCGAGCATCCTGAGCCTCTTTTACACTTTGCACTCTGCTCAGGAGACCATTCTGATCCTGCGATACGTGTGTTTACACCAAAAAGAGTGTTTCAAGAGCTTGAAGTCGCAAAGGACGAGTATATTCGAGCTACCTTCGGAGTACGGAAGGACCGGAAGATCCTTTTACCAAAGCTTGTCGACACATTTGCCAAGGAATCAGGTTTGTGCTCTGCTGGTGTCATGGAAATGATCCAACAGGCTCTGCCCGAATCTCTAAGGAAGAGCATCAAGAAATGTCTGCTTGCAAAATCAAGAAAGAGCATAGAATGGATTCCACACAACTTCACCTTCCGATATCTTATATCGAAGGAACTGGTGAAATGA 2040 0.4324 MGLDGVRENKMVGLRLAQTLKRSKSFPDKKKVEEDNPDNHIEASDRTKLDIGYLTDCTKSTRKQNPASEVQNNLKQEILELERRLQHQFEVRCTLEKARGYRASSLQNSNDLIIPKPATELIKEIALLELEVVYLEQHLLSLYRKAFDQQLSSVSPSTKEEKVEASPVTPKARVIEVSDVEILSKRGCSATQPDSHKLETPGKEYSIQSNGREPDAHGKEHNGSGLEKLLDSGVYRCHSSLSQYSAFATRTSPPAKPLDKSLRACHSQPLSMMEVNQLLWNMSYIVLLYHALVFAFTISSIINLSGSLFVVLTFSDLVQYAQSASSNVISLAEHLGTRISDHIPDTPNRLSEEMVKCISAIYCKLSDPSLTQPGLSSPSSSMSSMSGFSLGDQGDIWSPGFKNNSSFDVRLDNPFHVGGLKEFSGPYSTMVEVSWIYRESQKLGDTELLLQNFRSLICQLEDMNPGKLNHEEKLAFWINIHNALVMHAFLAYGIPQNNVKRLFLLLKAAYNVGGQTVSADTIQRSILGCRLSRPGQWLRVFFSTRTKFKAGDGRQSYAIEHPEPLLHFALCSGDHSDPAIRVFTPKRVFQELEVAKDEYIRATFGVRKDRKILLPKLVDTFAKESGLCSAGVMEMIQQALPESLRKSIKKCLLAKSRKSIEWIPHNFTFRYLISKELVK 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0227 679 MobiDBLite consensus disorder prediction 24 45 - -
Lele52g0227 679 PANTHER UNCHARACTERIZED 44 677 - -
Lele52g0227 679 Pfam Leucine-zipper of ternary complex factor MIP1 68 149 IPR025757 -
Lele52g0227 679 Pfam Protein of unknown function, DUF547 467 600 IPR006869 -
Lele52g0227 679 MobiDBLite consensus disorder prediction 189 207 - -
Lele52g0227 679 MobiDBLite consensus disorder prediction 189 223 - -
Lele52g0227 679 Coils Coil 71 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0227 Lele-ChrLele52 1361697 1365282 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g0211 49 1258531 1265254 Lele52g0227 52 1361697 1365282 hybridization
Lele50g0224 50 1340765 1344344 Lele52g0227 52 1361697 1365282 hybridization