Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0224 ATGGGGCTTGACGGGGTCGTAGAAAATAAAATGGTGGGATTGAGATTGGCTCAAACTCTCAAGCGTTCAAAGAGTTTTCCTGATAAGAAGAAAGTCGAGGAGGATAATCCAGATAATCACATCGAGGCCTCAGATAGAACGAAGCTGGATATCGGGTACCTCACAGATTGTACAAAATCTACGAGAAAACAAAACCCTGCAAGTGAAGTCCAAAATAATCTGAAGCAAGAGATTCTAGAACTTGAGAGAAGGTTACAACACCAATTTGAGGTGCGATGCACATTGGAAAAGGCTCTTGGATACAGGCCTTCATCTCTTCAAAATTCTAATGACGAGATAATACCCAAGCCAGCTACAGAATTAATCAAGGAAATTGCACTGTTAGAGCTGGAAGTTGTATATCTGGAACAACATCTTCTCTCCTTGTACCGTAAAGCATTCGATCAACAATTATCTTCCGTATCTCCATCTACCAAGGAGGAAAAGGTAAAAGCTTCCCCAGTAACACCTAAGTCAAGAGTCATTGAAGTTTCCGATGTTGAGATCTTATCCAAAGGAGGATGTTCTGCCACACATCCTGATAGTCATAAGCTTGAGACTCCAGGAAAGGAATATAGTATACAATCTAATGGACGTGAGCCAGATGCCCATGGAAAAGAACATAATGGAAGTGGACTAGAAAAGCTATTAGATTCCGGTGTTTATCGTTGTCATTCCTCGTTATCACAGTATTCAGCATTTGCAACTAGAACCTCTCCTCCAGCAGAACCTCTAGATAACTCTTTGCGCGCTTGTCATTCACAACCGTTGTCCATGATGGAGTATGCCCAATCTGCATCATCGAATGTGATCAGTCTGGCAGAACATCTCGGCACTCGCATATCTGATCATATTCCGGATACACCTAATAGGCTTTCTGAAGAAATGGTCAAATGCATATCAGCTATATATTGCAAACTTTCAGACCCGTCTTTGACGCAACCCGGCCTTTCATCCCCCAGTTCATCATTGTCCTCAATGAGCGGCTTCTCTCTGGGAGATCAAGGTGATATATGGAGTCCGGGGTTCAAGAATAATTCCTCCTTCGATGTACGGTTAGACAACCCTTTCCATGTGGAAGGACTCAAGGAGTTCAGTGGACCGTACAGCACCATGGTTGAAGTATCATGGATTTATAGAGAGAGTCAGAAATTGGGTGACACGGAGCTGCTGCTCCAGAATTTCAGGTCGCTTATCTGTCAATTGGAAGATGTGAATCCGGGGAAGTTGAATCATGAGGAGAAGCTAGCTTTTTGGATCAACATACACAATGCTTTGGTGATGCATGCATTTTTGGCGTATGGGATTCCACAGAACAAGGTGAAGAGACTATTTCTTCTCTTGAAGGCTTCATACAATGTTGGGGGTCAGACTGTTAGTGCAGACACAATACAAAGGTCCATCCTCGGATGCCGACTCTCTCGTCCCGGACAGTGGCTTCGGGTGTTCTTTTCCACAAGAACAAAATTCAAGGCTGGAGATGGACGACAATCTTATGCAATCGAGCATCCTGAGCCTCTTTTACACTTTGCACTCTGCTCAGGAGACCATTCTGATCCTGCGATACGTGTGTTTACACCAAAAAGGGTGTTTCAAGAGCTTGAAGTCGCAAAGGACGAGTATATTCGAGCTACCTTTGGAGTACGGAAGGACCGGAAGATCCTTCTCCCAAAGCTTGTCGACATATTTGCTAAGGAATCAGGTTTGTGCTCTGCTGGTGTCATGGAAATGATCCAACAGTCTCTGCCCGAATCTCTAAGGAAGAGCATCAAGAAATGTCAGCTTGCAAAATCACGAAAGAGCATAGAATGGATTCCACACAACTTCACCTTCCGATATCTTATATCGAAGGAACTGGTGAAATGA 1905 0.4383 MGLDGVVENKMVGLRLAQTLKRSKSFPDKKKVEEDNPDNHIEASDRTKLDIGYLTDCTKSTRKQNPASEVQNNLKQEILELERRLQHQFEVRCTLEKALGYRPSSLQNSNDEIIPKPATELIKEIALLELEVVYLEQHLLSLYRKAFDQQLSSVSPSTKEEKVKASPVTPKSRVIEVSDVEILSKGGCSATHPDSHKLETPGKEYSIQSNGREPDAHGKEHNGSGLEKLLDSGVYRCHSSLSQYSAFATRTSPPAEPLDNSLRACHSQPLSMMEYAQSASSNVISLAEHLGTRISDHIPDTPNRLSEEMVKCISAIYCKLSDPSLTQPGLSSPSSSLSSMSGFSLGDQGDIWSPGFKNNSSFDVRLDNPFHVEGLKEFSGPYSTMVEVSWIYRESQKLGDTELLLQNFRSLICQLEDVNPGKLNHEEKLAFWINIHNALVMHAFLAYGIPQNKVKRLFLLLKASYNVGGQTVSADTIQRSILGCRLSRPGQWLRVFFSTRTKFKAGDGRQSYAIEHPEPLLHFALCSGDHSDPAIRVFTPKRVFQELEVAKDEYIRATFGVRKDRKILLPKLVDIFAKESGLCSAGVMEMIQQSLPESLRKSIKKCQLAKSRKSIEWIPHNFTFRYLISKELVK 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0224 634 MobiDBLite consensus disorder prediction 186 225 - -
Lele50g0224 634 MobiDBLite consensus disorder prediction 24 44 - -
Lele50g0224 634 Pfam Leucine-zipper of ternary complex factor MIP1 68 149 IPR025757 -
Lele50g0224 634 PANTHER UNCHARACTERIZED 44 632 - -
Lele50g0224 634 Pfam Protein of unknown function, DUF547 422 555 IPR006869 -
Lele50g0224 634 Coils Coil 71 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0224 Lele-ChrLele50 1340765 1344344 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele50g0224 50 1340765 1344344 Lele51g0225 51 1274968 1278507 hybridization
Lele50g0224 50 1340765 1344344 Lele52g0227 52 1361697 1365282 hybridization