Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0180 ATGGAAGAAAGGTATGCTCACTATCTTTTTGAAAATGGGAGCTATGAGGAGGCAATGGAACATTTTCTTGCATCTCAAGTAGATATAACTTGTGTTCTTTCTCTGTATCCATCCATTATCCTCCCCAAGACGACCATTGTTACTGAGCCAGAGAAGTTGGGGGACATTTCCTTGGACGCATCATATCTCTCTAGAGATTCTTCAGGTCTGTCAGATGATATGGAAACCCCACCACCACCACCTTTGTCAGAATCTGATGCAGCGCTTGAATCCAAAAAGACGAGTCATAATACGCTTATGGCTCTCATAAATTTTTTGCAGAAAAAGAGATATAGTGTTATTGAGAAGGCCACTGCTGAGGGGACAGAAGAGGTTATTTTAGATGCAGTTGGGGACAACCTAGGGCGTGGTAGTGTTCCTGTTAGTTCAGGAGCTAGGGAGCTGGCTTCAGTATTGGATACTGTACTTCTCCAAGCATTGCTTCTTACTGGACAACCATCCTCTGTGCTAGAAATTCTGAGAGTTCCGAACTACTGTGATTTGAAGATATGTGAAGAGATACTTCGTAAAGGCAGCAATAATGTTGATTTATTAGAACTTTACGAGTGCAATTCAATGAACCGAGAATCTCTTGAGCTCCATCAGTTGGTGGAGGAGTCAAAGTCAAACCCATCAGAAGTTACACATAAGTTAAAGCCTGAGGCAATAATTGAATATCTCAAGCCTCTGCGTAATTCAGACCCCATGCTTGTTCTGGAGTACTCAATGCTTGTTCTTGAAAGCTGTCCGACACAAACCATTGAGCTCTTTCTCTCTGAAAAATTCCTGCAGATATGA 837 0.4205 MEERYAHYLFENGSYEEAMEHFLASQVDITCVLSLYPSIILPKTTIVTEPEKLGDISLDASYLSRDSSGLSDDMETPPPPPLSESDAALESKKTSHNTLMALINFLQKKRYSVIEKATAEGTEEVILDAVGDNLGRGSVPVSSGARELASVLDTVLLQALLLTGQPSSVLEILRVPNYCDLKICEEILRKGSNNVDLLELYECNSMNRESLELHQLVEESKSNPSEVTHKLKPEAIIEYLKPLRNSDPMLVLEYSMLVLESCPTQTIELFLSEKFLQI 278
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0180 278 Pfam Vacuolar sorting protein 39 domain 1 152 259 IPR019452 -
Lele52g0180 278 PANTHER CNH DOMAIN CONTAINING 3 274 IPR032914 GO:0016192
Lele52g0180 278 MobiDBLite consensus disorder prediction 66 90 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele52g0180 Lele-ChrLele52 1076229 1078180 Wgd
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g0162 49 982590 989189 Lele52g0180 52 1076229 1078180 hybridization
Lele50g0182 50 1067479 1071334 Lele52g0180 52 1076229 1078180 hybridization