Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g0885 ATGTCGTCGAAGGTTGTGTATGAAGGCTGGATGGTGCGGTATGGCCGGCGAAAAATCGGCCGATCGTTTATCCACATGAGATATTTCGTGCTCGAGCCCCGGTTGCTAGCTTATTACAAAAGGAAGCCACAAGATAATCAGGTTCCTATTAAAACAATGTTAATTGATGGCAACTGTAGAGTGGAGGATAGAGGCTTGAAGACCCATCATGGACATATGGTTTATGTTTTGTCTGTTTACAACAAGAAAGAGAAACACCATCGAATTACGATGGCAGCATTTAACATACAAGAGGCCCTAATGTGGAAGGAAAAAATTGAGTATGTAATTGATCAGCATCAGGGTGCACAGCCTTCAAATAGTAACCAATATATTTCTTTTGAGTACAAATCCGGGATGGATAATGGGAGAACGGCTTCATCCTCTGACCATGATAGCCACCTCAGTGCTCCAGAAGATGAAGAGGACACTCATCCAAATTTGTTAAGGAGGACGACGATTGGAAAAGGCCCCCCGGAATCTGTTTTGGACTGGACAAGAGAAGTAGACTCAGATTTGTCAAATCAAAATAATAACCAAACATTTTCAAGAAAGCATTGGCGTCTTTTACAATGCCAAAATGGACTTCGTATTTTTGAAGAGCTTCTTGAAGTTGATTACCTCCCAAGGAGTTGTAGTAGGGCAATGAAGGCTGTAGGTGTTGTGGAAGCAACATGTGAAGAAATTTTTGAGCTGGTGATGAGCATGGATGGAACACGGTTTGAGTGGGATTGCACTTTCCTATATGGTAGTTTAGTTGAGGAGGTGGATGGGCATACTGCAATACTTTATCATAGACTTCAGCTTGACTGGTTTCCAATGTTTGTGTGGCCCCGTGATCTTTGCTACGTACGCTATTGGCGCCGAAATGATGATGGAAGTTATGTTGTTTTGTTTCGATCCCGAGAGCATGAGAATTGTAGTCCACAACCAGGATGTGTTCGGGCCCATATTGAGAGTGGGGGATTCAATATTTCCCCACTAAAACCTCACAATGGGAGGCCAAGGACACAAGTTCAGCATCTTATGCAGATTGATTTGAAGGGATGGGGTGTGGGTTACGTATCTTCATTTCAGCAGCATTGTCTCCTTCAAATGTTGAATAGTGTTGCTGGTTTGCGTGAATGGTTTGCCCAAACAGATGAAAGAAATGCTCCTCCACGAATTCCTGTTATGGTTAATATGTCTTCAACATCCAATAATTCAAAGAATGGTCAGAAATCACATGATTCTTTAGCTCATTCTGCATCCTCCCTGGATCAAATGAATGCTGCAAATAGAAATTCTGTCATGATGGACGAATACTCTGATGAAGATGAAGATTTTCAAATAGCAGAATCTGAAGAAGAGGCATATGCAACTGGGCTTGAGAATGATGTAAAGAAAACAGCCTTGGAAGAAGAACCAGAAGATAAAATTGACTTATCATGGTTTTCGTGTAACCTACGGCATGATGATCATGATAATGCCCGTAACTGCTGGAATATTTCTGATGGAAACAATTTTAGAGTACGGAGCAAGCATTTTTTCCATGACAAGTCAAAGATTCCTGCTGGGAAACATCTTATGGATCTTGTTGCCGTTGATTGGTTCAAGGACACAAAAAGAATGGACCATGTGGCTAGGCGTCAGGGATGTGCTGCCCAAGTTGCATCAGAAAAAGGACTTTTCTCTATAGTGATCAATCTTCAGGTGCCTGGGTCAACACACTATAGTATGGTATTCTATTTTGTGACAAAAGCGTTAGTTCCTGGATCCCTCTTGCAACGTTTTGTTGATGGTGATGATGAATTCCGAAATAGCAGATTCAAACTCATCCCATCAGTCCCAAAGGGCTCATGGATTGTGCGACAAAGTGTTGGGAGTACACCTTGTTTACTTGGAAAGGCAGTTGATGTCAACTATATTCGTGGCCCCAAGTATTTAGAAATTGATGTTGATATTGGATCTTCTACTGTTGCTAATGGAGTTTTGGGGCTCGTAGTTGGTGTAATTACAACTTTGGTGGTCGATATGGCATTTCTTGTACAGGCAAACACTACAGATGAATTGACAGAGCGGCTTATCGGTGCTGTTCGTGTTTCACATTTGATGCTCTCATCTGCCATTGTTCCCAAACTGGATTCTGATAATGAATGA 2178 0.4183 MSSKVVYEGWMVRYGRRKIGRSFIHMRYFVLEPRLLAYYKRKPQDNQVPIKTMLIDGNCRVEDRGLKTHHGHMVYVLSVYNKKEKHHRITMAAFNIQEALMWKEKIEYVIDQHQGAQPSNSNQYISFEYKSGMDNGRTASSSDHDSHLSAPEDEEDTHPNLLRRTTIGKGPPESVLDWTREVDSDLSNQNNNQTFSRKHWRLLQCQNGLRIFEELLEVDYLPRSCSRAMKAVGVVEATCEEIFELVMSMDGTRFEWDCTFLYGSLVEEVDGHTAILYHRLQLDWFPMFVWPRDLCYVRYWRRNDDGSYVVLFRSREHENCSPQPGCVRAHIESGGFNISPLKPHNGRPRTQVQHLMQIDLKGWGVGYVSSFQQHCLLQMLNSVAGLREWFAQTDERNAPPRIPVMVNMSSTSNNSKNGQKSHDSLAHSASSLDQMNAANRNSVMMDEYSDEDEDFQIAESEEEAYATGLENDVKKTALEEEPEDKIDLSWFSCNLRHDDHDNARNCWNISDGNNFRVRSKHFFHDKSKIPAGKHLMDLVAVDWFKDTKRMDHVARRQGCAAQVASEKGLFSIVINLQVPGSTHYSMVFYFVTKALVPGSLLQRFVDGDDEFRNSRFKLIPSVPKGSWIVRQSVGSTPCLLGKAVDVNYIRGPKYLEIDVDIGSSTVANGVLGLVVGVITTLVVDMAFLVQANTTDELTERLIGAVRVSHLMLSSAIVPKLDSDNE 725
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g0885 725 SMART START_1 179 392 IPR002913 GO:0008289
Lele51g0885 725 Gene3D - 1 121 IPR011993 -
Lele51g0885 725 ProSiteProfiles PH domain profile. 4 111 IPR001849 -
Lele51g0885 725 CDD START 199 368 - -
Lele51g0885 725 ProSiteProfiles START domain profile. 200 362 IPR002913 GO:0008289
Lele51g0885 725 SUPERFAMILY PH domain-like 2 123 - -
Lele51g0885 725 SUPERFAMILY Bet v1-like 192 380 - -
Lele51g0885 725 MobiDBLite consensus disorder prediction 146 162 - -
Lele51g0885 725 Pfam Protein ENHANCED DISEASE RESISTANCE 2, C-terminal 507 710 IPR009769 -
Lele51g0885 725 Gene3D - 200 400 IPR023393 -
Lele51g0885 725 MobiDBLite consensus disorder prediction 404 428 - -
Lele51g0885 725 Pfam START domain 226 368 IPR002913 GO:0008289
Lele51g0885 725 PANTHER ENHANCED DISEASE RESISTANCE-RELATED 21 721 IPR045096 -
Lele51g0885 725 MobiDBLite consensus disorder prediction 400 428 - -
Lele51g0885 725 CDD PH 7 106 - -
Lele51g0885 725 MobiDBLite consensus disorder prediction 135 174 - -
Lele51g0885 725 SMART PH_update 5 113 IPR001849 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g0885 Lele-ChrLele51 5442222 5451674 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele51g0885 51 5442222 5451674 Lele51g0885 51 5442222 5451674 ECH
Lele50g0902 50 5693309 5703460 Lele51g0885 51 5442222 5451674 hybridization