Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0902 ATGTCGTCGAAGGTCGTGTATGAAGGCTGGATGGTGCGGTATGGCCGGCGAAAAATCGGCCGATCGTTTATCCACATGAGATATTTCGTGCTCGAGCCCCGGTTGCTAGCTTATTACAAAAGGAAGCCACAAGATAATCAGGTTCCTATTAAAACAATGTTAATTGATGGAAACTGTAGAGTGGAGGATAGAGGCTTGAAGACGCATCATGGACATATGGTTTATGTTTTGTCTGTTTACAACAAGAAAGAGAAACACCATCGAATTACAATGGCAGCATTTAACATACAAGAGGCCCTAATGTGGAAGGAAAAAATTGAGTATGTAATTGATCAGCATCAGGGTGCACAGCCTTCAAATGGTAACAAATATATTTCTTTTGAGTACAAATCCGGGATGGATAATGGGAGAACAGCTTCATCCTCTGACCATGATAGCCACCTCAGTGCTCCAGAAGATGAAGAGGACACTCATCCAAATTTATTAAGGAGGACGACAATTGGAAAAGGTCCGCCGGAATCTGTTTTGGACTGGACAAGAGAAGTAGACTCAGATTTGTCAAATCAAAATAATAACCTAGCATTTTCAAGAAAGCATTGGCGTCTTTTACAATGCCAAAATGGACTCCGCATTTTTGAAGAGCTTCTTGAAGTTGATTACCTTCCAAGGAGTTGTAGTAGGGCAATGAAGGCTGTAGGTGTTGTGGAAGCAACATGTGAAGAAATTTTTGAGCTGGTGATGAGCATGGATGGAACGCGATTTGAGTGGGATTGCACTTTCCTATATGGTAGTTTAGTTGAGGAGGTGGATGGGCATACTGCAATACTTTATCATAGACTTCAGCTCGACTGGTTTCCAATGTTTGTCTGGCTCCGTGATCTTTGCTATGTACGCTATTGGCGCCGAAATGATGATGGAAGTTATGTTGTTTTGTTTCAATCCCGAGAGCATGAGAATTGTGGTCCACAACCAGGATGTGTTCGGGCTCATATTGAGAGTGGTGGATTCAATATTTCTCCACTAAAACCTCGAAATGGGAGGCCAAGGACACAAGTTCAGCATCTTATGCAGATTGACTTGAAGGGATGGGGTGTGGGATACATATCTTCATTTCAGCAGCATTGTCTCCTTCAAATGTTGAATAGTGTTGCTGGTTTGCGTGAATGGTTTGCCCAAACAGATGAAAGAAATGCTCCTCCACGAATTCCTGTTATGGTTAATATGTCTTCAACATCCAATAATTCAAAGAATGGTCAGAAATCACATGATTCTTCTGCTCATTCTGCATCCTCCCTGGATCAAATGAATGCTGCAAATAGAAATTCTGTCATGATGGATGAATACTCTGATGAAGATGAAGATTTTCAAATAGCAGAATCTGAACAAGAGGCATATGCAACTGGGCTTGAGAATGATGTAAAGAAAACAGCCTTGGAAGAAGAACCAGAAGATAAAATCGACTTATCATGGTTTTTGGGTAACCTACGGCGTGATGAACGTGATAATGCCCGTGACTGCTGGAATATTTCTGATGGAAACAATTTTAGAGTACGGAGCAAGCATTTTTTCCATGACAAGTCAAAGATTCCTGCTGGGAAACATCTTATGGATCTTGTTGCTGTTGATTGGTTCAAGGACACAAAAAGAATGGACCACGTGGCTAGGCGTCAGGGATGTGCTGCTCAAGTTGCATCAGAAAAAGGACTTTTCTCTATTGTGATCAATCTTCAGGTGCCTGGGTCAACACACTACAGTATGGTATTCTATTTTGTGACAAAAGCGTTAGTTCCTGGATCCCTCTTGCAACGTTTTGTTGATGGTGATGATGAATTCCGAAATAGCAGATTCAAACTCATCCCATCAGTCCCAAAGGGCTCATGGATTGTGCGACAAAGTGTTGGGAGTACACCTTGTTTACTTGGAAAGGCAGTTGATATCAACTATATTCGTGGCACCAAGTATTTAGAAATTGATGTTGATATTGGATCTTCTACTGTTGCTAATGGAGTTTTGGGGCTCGTAGTTGGTGTAATTACAACATTGGTGGTTGACATGGCATTTCTTGTACAGGCAAACACTACAGATGAATTGCCAGAGCGGCTTATCGGTGCTGTTCGTGTTTCGCATTTGATGCTCTCATCTGCCATTGTTCCCAAACTGAATTCTGATGATGAATGA 2178 0.4169 MSSKVVYEGWMVRYGRRKIGRSFIHMRYFVLEPRLLAYYKRKPQDNQVPIKTMLIDGNCRVEDRGLKTHHGHMVYVLSVYNKKEKHHRITMAAFNIQEALMWKEKIEYVIDQHQGAQPSNGNKYISFEYKSGMDNGRTASSSDHDSHLSAPEDEEDTHPNLLRRTTIGKGPPESVLDWTREVDSDLSNQNNNLAFSRKHWRLLQCQNGLRIFEELLEVDYLPRSCSRAMKAVGVVEATCEEIFELVMSMDGTRFEWDCTFLYGSLVEEVDGHTAILYHRLQLDWFPMFVWLRDLCYVRYWRRNDDGSYVVLFQSREHENCGPQPGCVRAHIESGGFNISPLKPRNGRPRTQVQHLMQIDLKGWGVGYISSFQQHCLLQMLNSVAGLREWFAQTDERNAPPRIPVMVNMSSTSNNSKNGQKSHDSSAHSASSLDQMNAANRNSVMMDEYSDEDEDFQIAESEQEAYATGLENDVKKTALEEEPEDKIDLSWFLGNLRRDERDNARDCWNISDGNNFRVRSKHFFHDKSKIPAGKHLMDLVAVDWFKDTKRMDHVARRQGCAAQVASEKGLFSIVINLQVPGSTHYSMVFYFVTKALVPGSLLQRFVDGDDEFRNSRFKLIPSVPKGSWIVRQSVGSTPCLLGKAVDINYIRGTKYLEIDVDIGSSTVANGVLGLVVGVITTLVVDMAFLVQANTTDELPERLIGAVRVSHLMLSSAIVPKLNSDDE 725
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0902 725 SUPERFAMILY Bet v1-like 194 364 - -
Lele50g0902 725 PANTHER ENHANCED DISEASE RESISTANCE-RELATED 21 722 IPR045096 -
Lele50g0902 725 MobiDBLite consensus disorder prediction 404 433 - -
Lele50g0902 725 Pfam START domain 226 369 IPR002913 GO:0008289
Lele50g0902 725 ProSiteProfiles PH domain profile. 4 111 IPR001849 -
Lele50g0902 725 SUPERFAMILY PH domain-like 2 120 - -
Lele50g0902 725 Pfam Protein ENHANCED DISEASE RESISTANCE 2, C-terminal 507 710 IPR009769 -
Lele50g0902 725 SMART START_1 179 392 IPR002913 GO:0008289
Lele50g0902 725 MobiDBLite consensus disorder prediction 146 162 - -
Lele50g0902 725 Gene3D - 1 120 IPR011993 -
Lele50g0902 725 CDD START 192 368 - -
Lele50g0902 725 Gene3D - 200 400 IPR023393 -
Lele50g0902 725 CDD PH 7 106 - -
Lele50g0902 725 MobiDBLite consensus disorder prediction 400 433 - -
Lele50g0902 725 ProSiteProfiles START domain profile. 200 362 IPR002913 GO:0008289
Lele50g0902 725 MobiDBLite consensus disorder prediction 135 174 - -
Lele50g0902 725 SMART PH_update 5 113 IPR001849 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0902 Lele-ChrLele50 5693309 5703460 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele50g0902 50 5693309 5703460 Lele50g0902 50 5693309 5703460 ECH
Lele50g0902 50 5693309 5703460 Lele51g0885 51 5442222 5451674 hybridization
Lele50g0902 50 5693309 5703460 Lele52g0882 52 5732606 5742949 hybridization