Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g0706 ATGAAGTGTCGATCCGTAGCTTGCATATGGTCTGGCACTCCCCCACCTCACAGAGTTACTGCCGTCACTGGTTTCAGTCAACCGCCATCCTTCTATACAGGTGGATCCGATGGCTCCATCATCTGGTGGGCCCTCCCCGATAGTTATTCCAGCCTGGAAGTTAAAGCAGTGGGTATTTTGTGTGGTCACGCTGCACCGATCACTGATCTCGGAACTTGCAGTCCTACAATAACAGAGAAAGATACAGGCAGTTCGAGTGATTTTGTGGTTGAATCGACTTCAAGTAATTGTAGTGCATTAATAAGTGCATGTAGTGATGGCTTCTTGTGTGTATGGAGTAGAAGCAGTGGTCATTGCCGGTGCAGGAGGAAATTGCCTCCTTGGGTGGGCAGTCCATGCATGATTCGAACACTGCCTTCAAGAGCAAGATATGTATGTATTGGTTGTTCTTTCATGGACACCGTCCATTTGTCAGACCACTATTCTGTGAATGCCGTGGAAGGAAATGATGTTTTGATTGATAGAGAAACTCAGCCCAGGAAGCCTCCAAAATGCACTATCGTTATTGTCGACACATATTCACTTACAATTACCCAAACTGTCTTTCACGGAAATCTATCTATTGGCCCCATGAAGTTTATGGCTGTAGTTTCAGTGGATAATGATAAAGAGAGGCATTCTGTATTCGTGGCTGATTCAGTTGGTAAGCAACAGATGGTTTCTGTTTCAAAGGATCCTCATGATCAAGGGGAAAACTTTTCTAGTTTGAACAATGATACATCTCAGTTGGAAAGTTCTGTTTGGGTTGAGGGATTGAGTGGTGTGCGACAAGTTATTTCAATTGCAACCCATGGCAATTTTGCTGCTTTTATGTTTAAAGACCACTGCATATTCAGGTTACTGTCTAGTGATACAAAATTGGGAGAGATTTCCTTTTTGGACAATCTTTTATGTTTTGATGAGCATTCTACTCAAGCACATGTGATGGGGGCCATGCTTCTTGAAACTGTTGGGGCAAAGACTATGCCAAATTGTCATGAAAAGAGTTGTTTGATTCCAGAGAATTTTGTTGTCTGGAATAATATAGGTTATGCAGTTGTGTATAAAATATCATATCAGAATGACATTTTTCAATGTGAACCTCATTCTGAAATTCCTCCTACTTATTATAAGCCTGACGTGAGAGTATCCATTTTTTTCTTACATGTTTATCATTGGCTGCTACGTATTGAATCTGTCTGCTTTCACTTTGAGAACCCTTCACTATGGAGACCCCATGTCACTATCTGGTCACCACATCATTTTGACAATAAGCATGGTAAATTTTATCAGCAATGTAGAATGCTCAGGGAAGGTGTATCCTTCACTGACCTGTTTGAGAACTCTCCTCAGTTGAGAGGGTTAAATAGTGTGGGGACAGAATCAACTTCTAGTATGGGATGCTTAAGTAATTACAATATTAACGAGGGACGGACTGTTTCTTCTTCAATGATCATATCAGAGAGCCTTGTTGCTCCTTATGCTGTTGTATATGGTTTCTTAAGTGGATTAATAGAGGTTGTAAGATTTGATCTGTTCCAGAGGACGGGTTTAGATGGTGTAAGTTCCGAAACTGAGGAAAAGTCAGTTGCATGCAAACAATACTTCTCTGGGCACACAGGTGCCGTACTTTGTTTGGCAGCTCATCAATTGATGGGTAGCTCCAAAGGTCAGAGTTTTAATCAGGTTTTGGTGTCTGGAAGTGTTGATTGCACAGTTCGTATATGGGATCTCGACACTGGCTGTCTTATTATGGTTATGCATCATCATGTGGCATCAGTGCGCCAAATTATTCTTCCCCCATCTTTGACTGATCGTCATTGGAGCAATTGCTTCCTTTCAATTGGAGATGACTCATGTGTTGCTCTTGTTTCTCTTGAAACTTTGCAGGTGGAGAGAATGTTTCCTGGTCACATGAACTATCCTTCAAAAGTTGTATGGGATGGAGCTAGAGGTTACATTGCTTGTCTCTGCCAAACGCATACTGGAACATCTGATACTTCTGTTCTGTTATACATATGGGATGTAAAGACTGGTTGCCGTGAGCGAATTCTTCGTGGTACAGCTGCACATTCTATGTTTGATCATTTTTGTGATAGCATTAGAATAAACTCCTTATCTGGCACCTTGTTGAATGGAAATACATCAGTTTCTTCGTTACTTCTCCCAACTGTTGAAGATGGAAGGTTGTTTAAGTCCTCATCCGGTTCTTCAGGGAACTTGGTCACTTCATCTAGGTCATCACCAAGCATTTCAAATGTGGCTGAGCTTAATGCTTCCAAGAATGATGCAGACAATGCAAACAAAGATAAAGCATATTCATCTTCTCTGTCCACCCTTTGGAGTAAGAAGCACCCAATAAGATGCTCTAGCCCATTCCCTGGTAATGTGGTGTTGAGTTTTGACCTTGCATCATTGATGTTCTCTTATCAGAAGCCTGAGTTCATTGTTAGTGGAGGTTCTGAGCCAGCGAATATCAATTCAAAGCAGCAGGATATTCAAAAACGAAATTCCAACCATGAAAGATGGGTCCTAACTGATACTGTAGAGGGGCATGATAAGCTATTTGAAGAATACTTACTTCGATTTAGCTTGTCGTTTTTACATTTGTGGGATGTAGACACTGAGCTTGATGATTTGCTGATGAGAGACATGAAGCTGAGGAGACCAGAAAATTTTAAAATAGCTGCCGGTCTGCAGGGGGATAGAGGATCTTTGACATTGACATTTCCTGGTTTGAGTTCTGTTCTCGAGCTTTGGAAATCATCAGCTGAGTTTTGTGCAATGAGGTCATTGATGATGGTATCCCTTGCCCAACGTTTGATTAGCATGTCTCGCTTTGATTCAGCAGCTAGCAGTTCTTTAGCAGCATTCTATACTCGGAATTTCACAGAAAAAATTTCGGATGTGAAGCCACCTTCATTGCAGCTTCTGGTGGCTTTTTGGCAAGCTGAGAGTGAACATGTACGTATGGCAGCACGTTCTTTATTTCATTGCGCAGCCTCTCATGCGATCCCACTACCTCTGTGCAATTTAAACACTAATGAGCAGACTAATATTAACTCTGTAGCTGGAAGCAGAGGTATAGAGCAAGGAAATACCGGATTAAAAAGTGATGAAGTAATCTCCCAAGCTGAGGAATCCAATATACTTGCATGGCTAGAATCATTTGAAGTGCAAGATTGGATTTCTTGCGTTGGGGGAACAAGTCAAGATGCAATGACGTCTCACATTATTGTTGCTGCTGCATTGGCTATCTGGTATCCTAGTCTTGTTAAGCCAAGCGTTGCCACGTTAGTTGTTCATCCATTGATGAAGTTGGCTATGGCCATGAATGAGAAGTATAGCTCCACTGCTGCTGAGCTTCTTGCGGAGGGCATGGAGAATACGTGGAAATATTGTATTGGGTCTGAGATACCTCGTTTGATTGGTGATATCTTTTTCCAAATAGAATTGAACGGGTCATCGACAAATTTAGCTGCAGAAATTCCAGCTGTATCAATTTCTATTCAACAGTCTTTGATTGAGATTCTTCTTCCTAGTTTAGCCATGGCTGATATACCTGGTTTTTTGACTTTGGTTGAAAGTCAAATTTGGTCTACTGCATCTGATTCACCTGTCCACTTAATATCGCTGATGACTCTCATCAGGGTTATGCGTGGTTCTCCAAGGAACTTGGCTCAATATCTTGACAAGGTTGTCAACTTCATTTTACATACTATAGATCCAAGCAACTCAGTCATGCGAAAAACTTGCTTCCAAAGTTCAATGACAACTTTAAAGGAGGTTATACGTGTATATCCTATGGTTGCTATGAATGATACATGGACCAGATTGGCTGTTGGGGATGTGATTAGAGAGGCTAATAACCCAAGCATCAGGGTTTATGACATGCAGAGTGTGACAATGATAAAAGTTTTGGATGCAAGTGGGCCTCCTGGCCTCCCAAGCTTGTTTGCAGAAGCATCAGAAACAATGTTTACTGCTATTTCAGCACTAAGCTTTTCACCTGATGGAGAGGGGCTAGTTGCCTTTTCTGAGCATGGGCTGATGATCAGATGGTGGTCATTGGGATCTGTCTGGTGGGAGAAACTAAGCCGGAACTTGGTTCCTGTCCAGTGCACCAAAGTAATTTTTGTTCCTCCTGAGGGCTTTTCTCCTAATTCATCCAAGTCAAGTATAATGGCCAACATATTGGGAGCGGATGGACAGTCAAACTTTAAGGAGAATGCTAGAGATCCAGGTCATGGGGAGAATTTAAAACAATTGCTTCATAATCTTGACTTCTCTTATAGACTAGAATGGGTTGGTGAGCGGAAGGTACGTCTTACAAGGCATGGCCATGAATTAGGCATTTTCATGTTGTAA 4407 0.4177 MKCRSVACIWSGTPPPHRVTAVTGFSQPPSFYTGGSDGSIIWWALPDSYSSLEVKAVGILCGHAAPITDLGTCSPTITEKDTGSSSDFVVESTSSNCSALISACSDGFLCVWSRSSGHCRCRRKLPPWVGSPCMIRTLPSRARYVCIGCSFMDTVHLSDHYSVNAVEGNDVLIDRETQPRKPPKCTIVIVDTYSLTITQTVFHGNLSIGPMKFMAVVSVDNDKERHSVFVADSVGKQQMVSVSKDPHDQGENFSSLNNDTSQLESSVWVEGLSGVRQVISIATHGNFAAFMFKDHCIFRLLSSDTKLGEISFLDNLLCFDEHSTQAHVMGAMLLETVGAKTMPNCHEKSCLIPENFVVWNNIGYAVVYKISYQNDIFQCEPHSEIPPTYYKPDVRVSIFFLHVYHWLLRIESVCFHFENPSLWRPHVTIWSPHHFDNKHGKFYQQCRMLREGVSFTDLFENSPQLRGLNSVGTESTSSMGCLSNYNINEGRTVSSSMIISESLVAPYAVVYGFLSGLIEVVRFDLFQRTGLDGVSSETEEKSVACKQYFSGHTGAVLCLAAHQLMGSSKGQSFNQVLVSGSVDCTVRIWDLDTGCLIMVMHHHVASVRQIILPPSLTDRHWSNCFLSIGDDSCVALVSLETLQVERMFPGHMNYPSKVVWDGARGYIACLCQTHTGTSDTSVLLYIWDVKTGCRERILRGTAAHSMFDHFCDSIRINSLSGTLLNGNTSVSSLLLPTVEDGRLFKSSSGSSGNLVTSSRSSPSISNVAELNASKNDADNANKDKAYSSSLSTLWSKKHPIRCSSPFPGNVVLSFDLASLMFSYQKPEFIVSGGSEPANINSKQQDIQKRNSNHERWVLTDTVEGHDKLFEEYLLRFSLSFLHLWDVDTELDDLLMRDMKLRRPENFKIAAGLQGDRGSLTLTFPGLSSVLELWKSSAEFCAMRSLMMVSLAQRLISMSRFDSAASSSLAAFYTRNFTEKISDVKPPSLQLLVAFWQAESEHVRMAARSLFHCAASHAIPLPLCNLNTNEQTNINSVAGSRGIEQGNTGLKSDEVISQAEESNILAWLESFEVQDWISCVGGTSQDAMTSHIIVAAALAIWYPSLVKPSVATLVVHPLMKLAMAMNEKYSSTAAELLAEGMENTWKYCIGSEIPRLIGDIFFQIELNGSSTNLAAEIPAVSISIQQSLIEILLPSLAMADIPGFLTLVESQIWSTASDSPVHLISLMTLIRVMRGSPRNLAQYLDKVVNFILHTIDPSNSVMRKTCFQSSMTTLKEVIRVYPMVAMNDTWTRLAVGDVIREANNPSIRVYDMQSVTMIKVLDASGPPGLPSLFAEASETMFTAISALSFSPDGEGLVAFSEHGLMIRWWSLGSVWWEKLSRNLVPVQCTKVIFVPPEGFSPNSSKSSIMANILGADGQSNFKENARDPGHGENLKQLLHNLDFSYRLEWVGERKVRLTRHGHELGIFML 1468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g0706 1468 Gene3D - 2 251 IPR015943 GO:0005515
Lele51g0706 1468 SMART WD40_4 542 590 IPR001680 GO:0005515
Lele51g0706 1468 SMART WD40_4 641 688 IPR001680 GO:0005515
Lele51g0706 1468 SMART WD40_4 593 638 IPR001680 GO:0005515
Lele51g0706 1468 SMART WD40_4 1333 1369 IPR001680 GO:0005515
Lele51g0706 1468 SMART WD40_4 5 44 IPR001680 GO:0005515
Lele51g0706 1468 SMART WD40_4 53 113 IPR001680 GO:0005515
Lele51g0706 1468 Gene3D - 476 867 IPR015943 GO:0005515
Lele51g0706 1468 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 550 601 - -
Lele51g0706 1468 PANTHER RABCONNECTIN-3B, ISOFORM A 3 1467 - -
Lele51g0706 1468 SUPERFAMILY WD40 repeat-like 542 705 IPR036322 GO:0005515
Lele51g0706 1468 SUPERFAMILY ARM repeat 962 1267 IPR016024 -
Lele51g0706 1468 ProSiteProfiles Trp-Asp (WD) repeats profile. 549 599 IPR001680 GO:0005515
Lele51g0706 1468 Pfam WD domain, G-beta repeat 545 590 IPR001680 GO:0005515
Lele51g0706 1468 ProSitePatterns Trp-Asp (WD) repeats signature. 577 591 IPR019775 -
Lele51g0706 1468 SUPERFAMILY WD40 repeat-like 9 159 IPR036322 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g0706 Lele-ChrLele51 4251835 4260292 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele51g0706 51 4251835 4260292 Lele51g0706 51 4251835 4260292 ECH
Lele49g0687 49 4159184 4167591 Lele51g0706 51 4251835 4260292 hybridization
Lele50g0721 50 4426691 4430077 Lele51g0706 51 4251835 4260292 hybridization