Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g0640 ATGGGAAGAAATGACCTCGAAAAGTTTGAAGCAACCAATAGATTGTTCAGAAAAAACACAAGTAGCGATTCTTCACATATTTTAAAGAAAGAAAATGAACATCCTGCTTGGTTACCTGATGGCTGGAATGTGGGGTTCAAAATTCGAAAAAGTGGTATACACAAGGGAGCTAGATACAAGTGCTTCACTGATCCATTGAAAAGGTTCAAATTCTACTCCAAACCTGAGGTATTACGGTATCTTGAAACTGTAGATGGCAGCAACTGCACTTTTAACAAGGGATGCACTGCTAAGCAATCTACAAGCAATCTGTCATCTGCCGCCAAAAGACAGAAACTGAAGCATTCTGCAATCAAAGAGCAGCTTTTTGCCGGCAAAGAAGTATCTGACGGTGTCTTAGAATTGTCAGGTGCCTGCAGCTCAAAAGAAGGGCAAAATATGAAGGTATCTGCTGAATTTACGGTTTCTCCAGTTTTGACATCTGACTTTGCGGTCAAGATGCATTTGCCCAAGGATTCAGCTGAAAACAGTTCTGAAATTAAACAATCTAATCCAGCTGATGTGCAAGAGAAGAATTGTTTTATGAGTGGAGTGGAGAAGGCTGATGAAGAGAACCCTTTCCACCCAAGCATATCCAAAAACGAGAAAAAATTGAACACGCCTCACCAGAATTTGAGACAACTTGCTGGGAAAGCCGACCAGTTAACCAACACTGTGACCCATGAACCGGCTCGTCGAGTTTCAAAGAGAAACTTAAGGAAAAGTGTAACCCCTATAGACATTGACTTGAAAAGTAAATCATCTCATAAGATGAACGTTGTCCCAGAAATTCAGTGTGTTCAAAAAACATGTGGAGAGTTACTGAACAAAAACAGCAAGTTTGAAGCTGAACTAGTTTTCAGAGATCAACCGTGCCAGCTAGTAACAGAGAAAATAGATGACAAAGAGGTAGAACTTAAGTATTCTCAGTCTCAGGATTCCAGTGCACAAAGCCTCGAGGTTGAAATGAAGAACATCACGAGTGAATTACCTGCTAGGGATGTTTCTCATAGGGGTCAAACTTTGGATTCTGAAGCTAATGGCGTCAAAGAAGACAAATTGCCTGTCAATCAGAATGGAAAAATTGATGCCTCTGAAATTCATGTTAACTTGAACAAATATAGTAGTAAGAAAGATCGCTGCAATCCACATCGGCGGGCTTCAAAGCGACTTGCTGGATTAGAACCAGAGGTGATGACGAACTCCATAGTCTGCAAAAGAGCTCCTGAATATAAGAGCAGAAGGTCTAAAGGTATGGTCAATGCAGTATTACGGCAAACTGAGGGTGGGCTGGCAGTTGATCTTGCAGATGATGCGTCTGCCTTTATGAATATGCCATTAAATCGAGAGACATCAAATAAAACATTAAAATCTCCTAAAACTCCACCCATTACCCATGAGCAACCAGAAAAGTATGGAAATGAAGAAATAGATTATGAGAAATCAGAACCTCAGCAGTCCCTTGCTTCCCAATATTCTCAGTCTGACGCGTGCTTGGAATTTGCAATTAAGACTCTCCCTGGTGTGTTACCCGTTGAAGATTTGATTGGTAATGGGCCTAATCTGGCTACTGAAGCTATGCTGTTTGACAGTGCTAAAGAAAGCAGCAGTGACAGAAATGTGCAGGTAAAATCAAAAAAATTGAAGAGCAAGAAAGAGCTTAAATTGCCTCGCCGGTTGTCAAGGAGACTTTCTGGCCATGAGCCTGAGGTAAAGCCTGCTTTAAGAGCTCTAGAATATGCAACTAGGAAATCATGCAAAGATAAATCAACTGCAACTGTGGTTTTGAACAATGGAGTTTCTAAGCTAGGTAGTGCTGGCAAAGAAACAGAGCTTACTCTTGATGCATCTAACAGTTTGTTGAAATCAAGTGTACTTGGTGAATCATCGAAAAAGAATGAAAAGTCATATGAAGTCCAAAATTTTCTCAAGTATCAACAACAGAAGCTTGAAACTGATAGAATTGGTGACAAGAGTTTGGAGACACAGGGCTGCTTACTGTTTGGGATGGACGTGGAGCACACCCTTCGTGCATCCGACAGTTTGGAAACAAGAGCACTTGAAGAAACATCGAACAAGAGTGAGAAGCCATATGAAACCCAAACGGTTGAAGAATTGAACGAGAGTGTGAAACTATTTGAAACCCAAACTATTCCCATAGAGCAACAGCAGGAGCTTGAAACCATGATGAGTTCAGAAACACAGCTTGGCTTCCCAGTTGGGAAAGAAACTGAGTGTACACTTCATGCATCCGGCAGTTCAGAAACAAGAGTACTCAAAGACACATCAAACAAGAGTGTGAAATCACATGAATCTCAAACTATTGAAGAATTGTTATATGAAGATCAAACTGTTGCCAATGAGCAACAGCAGAAGCTTGAAGCTGAAAAACTTGGTGATGTGATGACAGAGTCACAAACGTGCTTAAACTATGAGCAGTTTTGGTCAGATCCATGCCTAGAATTTGCAATCAAGACCCTAACAGGTACATTGCCAGTGGACGATGCTGCCAGCATTTTGCCAGTTATGGCCCCTGATAAAAATGACCAAGCAGACAAGGAATTGCTTGACGGTGTGGTAAAGAATCGCGAAGAAGAAAGTCGTGATAACTTGAGCCAATCTCAAAATAATAAACTCATGATGCCTAATTTATTTTTCCAGCCTCCGAAACAAACACAGTTAAGGGCCAGCTCCACTTTTTGCCAAAATAGGGTGTCTTGTAGTGAAGAAGTTGATTCAACCAGGAATATGAGTGAAGGAGAGCCCCTTTGTATGGAAGACTTGAATACAACAAAACCTGTGCATCAACAAATAACTGGAAGCTCAGTTATCCATGAAGAGGTATCAAAGGAAATCCCTCAAGTTCTTGATGTCGATGCTGTTCCATCTGAGCAACCACAACTTGAAAATGAAATCATGAGCCGTGAGAAACCCGAGGCTCAGTTTCGTTATCCATTTATGGATTCTTGGTCAGACCCAAGTCTGGAATTTGCATTCAAGACTCTTACAGGTGCCATAACTATCGAGGAAAATTTGCCAATTCAAGGATGTTTGGAGGAAACTTCCATATGGAATGGCCAGAGGGACAGTTACTCATCGTTACCGGATTTCGGATCAACGAGTTTTTCTCAAAGTGATATATCATCCTACTACAATATAGAGGAGAGGTCCATACCAGAGCAGCAGCCACAAACGAGCCTTGGCTTGGAGGTTGATCCTCAGAAATACCATTCTCATTGCAATAGGAAAACTCCAAGAAGAAAGAGATCAAAAGTTAAAGATGAAAAAGGAAAAACTCACGTTGCTTCTCCTACGATATCATCATTTGTGCCAACATCACTGTCCAATATCTTCAATGTGAGTTCCGAAACGTCACCGGTCAAGTTGAAAACAAAAGTTTCATTTCATTCCGGATCAGATCCTTTCCCTGCTTTCACAATTCATCACTACTGTAAATGCGTGCTAACTTCGACTGTTTTGACTAATTGA 3528 0.4104 MGRNDLEKFEATNRLFRKNTSSDSSHILKKENEHPAWLPDGWNVGFKIRKSGIHKGARYKCFTDPLKRFKFYSKPEVLRYLETVDGSNCTFNKGCTAKQSTSNLSSAAKRQKLKHSAIKEQLFAGKEVSDGVLELSGACSSKEGQNMKVSAEFTVSPVLTSDFAVKMHLPKDSAENSSEIKQSNPADVQEKNCFMSGVEKADEENPFHPSISKNEKKLNTPHQNLRQLAGKADQLTNTVTHEPARRVSKRNLRKSVTPIDIDLKSKSSHKMNVVPEIQCVQKTCGELLNKNSKFEAELVFRDQPCQLVTEKIDDKEVELKYSQSQDSSAQSLEVEMKNITSELPARDVSHRGQTLDSEANGVKEDKLPVNQNGKIDASEIHVNLNKYSSKKDRCNPHRRASKRLAGLEPEVMTNSIVCKRAPEYKSRRSKGMVNAVLRQTEGGLAVDLADDASAFMNMPLNRETSNKTLKSPKTPPITHEQPEKYGNEEIDYEKSEPQQSLASQYSQSDACLEFAIKTLPGVLPVEDLIGNGPNLATEAMLFDSAKESSSDRNVQVKSKKLKSKKELKLPRRLSRRLSGHEPEVKPALRALEYATRKSCKDKSTATVVLNNGVSKLGSAGKETELTLDASNSLLKSSVLGESSKKNEKSYEVQNFLKYQQQKLETDRIGDKSLETQGCLLFGMDVEHTLRASDSLETRALEETSNKSEKPYETQTVEELNESVKLFETQTIPIEQQQELETMMSSETQLGFPVGKETECTLHASGSSETRVLKDTSNKSVKSHESQTIEELLYEDQTVANEQQQKLEAEKLGDVMTESQTCLNYEQFWSDPCLEFAIKTLTGTLPVDDAASILPVMAPDKNDQADKELLDGVVKNREEESRDNLSQSQNNKLMMPNLFFQPPKQTQLRASSTFCQNRVSCSEEVDSTRNMSEGEPLCMEDLNTTKPVHQQITGSSVIHEEVSKEIPQVLDVDAVPSEQPQLENEIMSREKPEAQFRYPFMDSWSDPSLEFAFKTLTGAITIEENLPIQGCLEETSIWNGQRDSYSSLPDFGSTSFSQSDISSYYNIEERSIPEQQPQTSLGLEVDPQKYHSHCNRKTPRRKRSKVKDEKGKTHVASPTISSFVPTSLSNIFNVSSETSPVKLKTKVSFHSGSDPFPAFTIHHYCKCVLTSTVLTN 1175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g0640 1175 MobiDBLite consensus disorder prediction 461 475 - -
Lele51g0640 1175 Gene3D - 4 123 - -
Lele51g0640 1175 MobiDBLite consensus disorder prediction 696 715 - -
Lele51g0640 1175 Pfam Methyl-CpG binding domain 32 84 IPR001739 GO:0003677
Lele51g0640 1175 MobiDBLite consensus disorder prediction 1093 1107 - -
Lele51g0640 1175 MobiDBLite consensus disorder prediction 1090 1112 - -
Lele51g0640 1175 PANTHER OS04G0193200 PROTEIN 886 1077 IPR038945 -
Lele51g0640 1175 MobiDBLite consensus disorder prediction 461 484 - -
Lele51g0640 1175 ProSiteProfiles Methyl-CpG-binding domain (MBD) profile. 28 96 IPR001739 GO:0003677
Lele51g0640 1175 SUPERFAMILY DNA-binding domain 34 90 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g0640 Lele-ChrLele51 3867578 3874567 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele51g0640 51 3867578 3874567 Lele51g0640 51 3867578 3874567 ECH
Lele49g0622 49 3766382 3771377 Lele51g0640 51 3867578 3874567 hybridization
Lele50g0650 50 3983121 3988065 Lele51g0640 51 3867578 3874567 hybridization