Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g0177 ATGGTTCACAGTGCCTACGATTCTTTCCAACTCCTCCACAGTTGTCCTTCGAAGATCGAAGCTGTCGTATCTTACGGCTCTAAGCTCCTCCTGGGCTGCTCTGATGGCTCCCTCCGCATTTACGCTCCAGAATCATCCGATTCCGATCGGTCTCCGTCGGCCGATCAACACGCTCAGGAGCTGCGGAAGGAAGCCTACGTACTCGAAAGAAACTTGAAGGGCTTTGCGAAGAAGCCTATCTTATCAATGGAGATCTTGGCATCGAGGGAACTGCTTCTTTCACTTTCCGAATCTATTGCTTTTCACCATCTTCCTAATTTTGAAACCATAGCAGTTATCACCAAGGCCAAGGGCGCCAATGTGTTCTCCTGGGATGACCGAAGAGGTTTCTTATGCTTTGCGAGGCAAAAGAGGGTCTGTATTTTCAGACACGATGGTGGCAGAGGGTTTGTGGAGGTGAAAGAATTTGGTGTTCCAGATGTGGTGAAGTCGATGTCATGGTGTGGTGAAAATATATGTCTGGGGATTAGAAGAGAATATGTAATACTGAATGCTACAAACGGTGCGTTGTCTGAGGTATTTCCTTCTGGGAGACTAGCGCCGCCTTTAGTAGTCTCTCTACCTTCGGGGGAGCTTCTTCTTGGCAAGGAGAACATTGGGGTCTTTGTGGACCAAAACGGGAAACTTCTTCCAGAAGGCAGGATTTGTTGGTCAGAGGCTCCTGCAGAAGTTGTAATCCGGAAACCATATGGAATAGCCCTGCTGCCAAGATTTGTAGAGGTTCGATCCCTTCGAGATCCTTTTCCACTTATACAGACTGTTGTTCTTCGAAATGTTCGTCATCTTCACCAAAGCAGCAATTCTGTTATTCTTGCATTAGATAATTCTGTTTACGGACTCTTCTCTGTTCCTCTTGGAGCCCAGATTGTTCAATTAACAGCATCTGGGGACTTTGAAGAAGCTCTGTCATTGTGCAAACTCCTTCCTCCTGAAGATTCAAATCTCCGTGCTGCAAAGGAGGGTTCAATCCATATAAGATATGCTCACTATCTTTTTGAAAATGGGAGCTATGAGGAGGCAATGGAACATTTTCTTTCATCTCAAGTAGATATAACTTATGTTCTTTCTCTGTATCCATCCATTATCCTTCCCAAGACCACCATTGTTACTGAGCCAGAGAAGTTGGGGGACATTTCCTTGGACGCATCATACCTCTCCAGAGATTCTTCAGGTCTGTCAGATGATATGGAAATCCCACCACCACCACCACCTTTGTCAGAATCTGATGCAGCACTTGAATCCAAAAAGATGAGTCATAATATGCTTATGGCTCTCATAAAGTTTTTACAGAAAAAGAGATATAGTGTTATTGAGAAGGCCACTGCTGAGGGGACAGAGGAGGTCGTTTTAGATGCAGTGGGGGACAACCTAGTATCCTATAACAGCAGTAGGTTTAAGAAAACAAACAAGGGGCGTGGTAGTGTTCCTGTTAGTTCAGGAGCTAGGGAGATGGCTTCAGTGTTGGATACTGCACTTCTCCAAGCATTGCTTCTTACCGGACAATCTTCCTCTGCCCTAGAACTTTTGAGAGTTCCGAACTACTGTGATTTGAAGATATGTGAAGAGATACTCCGTAAAGGCAGCAATAATGTTGCTTTATTAGAACTTTACAAGTGCAATTCAATGCACCGAGAAGCTCTTGAGCTCCTTCATCAGTTGGTGGAGGAGTCAAAGTCAAACCCATCCGAAGTTACACATAAGTTAAAGCCTGAGGCAATAATTGAGTATCTCAAGCCTCTGTGTAATTCAGACCCCATGCTTGTTCTGGAGTACTCAATGCTTGTTCTTGAGAGCTGTCCAACACAAACTATTGAGCTTTTTCTCTCTGGAAATATTCCTGCAGATATGGTGAACTCCTATTTGAAGCAACATTCTCCAAATATGCAGACTACTTACTTGGAACTCATGCTTGCAATGAATGAGAGTGCCGTCTCTGGAAATTTGCAAAATTAA 2013 0.4431 MVHSAYDSFQLLHSCPSKIEAVVSYGSKLLLGCSDGSLRIYAPESSDSDRSPSADQHAQELRKEAYVLERNLKGFAKKPILSMEILASRELLLSLSESIAFHHLPNFETIAVITKAKGANVFSWDDRRGFLCFARQKRVCIFRHDGGRGFVEVKEFGVPDVVKSMSWCGENICLGIRREYVILNATNGALSEVFPSGRLAPPLVVSLPSGELLLGKENIGVFVDQNGKLLPEGRICWSEAPAEVVIRKPYGIALLPRFVEVRSLRDPFPLIQTVVLRNVRHLHQSSNSVILALDNSVYGLFSVPLGAQIVQLTASGDFEEALSLCKLLPPEDSNLRAAKEGSIHIRYAHYLFENGSYEEAMEHFLSSQVDITYVLSLYPSIILPKTTIVTEPEKLGDISLDASYLSRDSSGLSDDMEIPPPPPPLSESDAALESKKMSHNMLMALIKFLQKKRYSVIEKATAEGTEEVVLDAVGDNLVSYNSSRFKKTNKGRGSVPVSSGAREMASVLDTALLQALLLTGQSSSALELLRVPNYCDLKICEEILRKGSNNVALLELYKCNSMHREALELLHQLVEESKSNPSEVTHKLKPEAIIEYLKPLCNSDPMLVLEYSMLVLESCPTQTIELFLSGNIPADMVNSYLKQHSPNMQTTYLELMLAMNESAVSGNLQN 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g0177 670 ProSiteProfiles Citron homology (CNH) domain profile. 16 289 IPR001180 -
Lele51g0177 670 PANTHER CNH DOMAIN CONTAINING 1 662 IPR032914 GO:0016192
Lele51g0177 670 SUPERFAMILY WD40 repeat-like 23 179 IPR036322 GO:0005515
Lele51g0177 670 MobiDBLite consensus disorder prediction 409 429 - -
Lele51g0177 670 Pfam Vacuolar sorting protein 39 domain 1 508 616 IPR019452 -
Lele51g0177 670 Pfam CNH domain 26 284 IPR001180 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g0177 Lele-ChrLele51 1014832 1019290 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g0162 49 982590 989189 Lele51g0177 51 1014832 1019290 hybridization
Lele50g0182 50 1067479 1071334 Lele51g0177 51 1014832 1019290 hybridization