Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g0004 ATGGACCTTCCCCGGCGACCTCTTACCTCCCACAAACCTCCCCATTTGCCCCCCAATAAGCCTCCTTCCGATTCCCCCTCCTTCCCCTTCTCTCCCCTTCACTTCACCAATGCTCTCTTCTTCTCCCTTTTCTTCTCCGTCTCCTATTTTCTCCTTCACCGCTGGCGCGACAAGATCCGCACGTCCACTCCCCTCCACGTCGTCACCCTCTCTGAGATTGCTGCCATTATCTCCTTCCTTGCCTCCGTCGTCTACCTTCTTGGTTTCTTCGGCATTGGCTTTCTCCACCCCCTTTCTTCTCGTTCTTCCTCCGATGACGACCTCGATTTGGACGACGACGTTGCTATCATTTCCAAGGACGATAGACGCAATCCTGGCCCTTGCCCAGCCGCCCTCCTCGATTGCTCTGTAGTCAATCCTCCCACTCCACAACTCACCCAGAAGCTCGATGTGCCTGTTCCCCCCAAAAGCTTCGACGACGCCCCCCCTCCCTTCTCTCTCGACGACGAAGAAATTGTCCGCTCCGTGATCTTGGGCTCCATTCCGTCCTACTCGCTCGAATCAAAGTTGGGTAATTGTCGTCGGGCGGTGGCCATTCGAAGAGAGGTCATGCAGAGAATTAACGGCAAGTCCCTCAAAGGTTTGCCCGTCGAAGGGTTCGATTACAATTCGATACTGGGACAGTGTTGTGAGATGCCTATCGGGTATGTGCAGATCCCCGTGGGGGTGGCGGGTCCGTTGTTGCTTGATGGGGTTGAGTACACGGTGCCTATGGCCACCACGGAAGGTTGTCTTGTCGCCAGCACCAACCGAGGTTGTAAGGCCATCTACGTTTCTGGCGGAGCTTCTTCTATTTTGCTCGCGGATGGGATGACTAGAGCTCCTGTGGTGAGGTTCTCCACCGTCAAGAGAGCCGCTCAATTAAAGTTCTTCCTGGAGGATCCTCTTAATTTTGACTCGCTTGCCGTCGTTTTCAACAAGTCAAGCAGATTTGCCAGGTTACAGAGTTTTCAGTGTGCATTGGCAGGCAAGAATGTATACATCAGATTCCGATGCAGCACCGGGGACGCCATGGGGATGAACATGGTATCCAAAGGCGTCCAGAATGTCCTTGATTATCTCCGGGAAGGCTTCTCAGACATGGATGTTATTGGCGTTTCTGGAAATTATTGCTCAGACAAGAAAGCAGCAGCAGTAAACTGGATTGAAGGGCGTGGCAAATCTGTGGTCTGTGAAGCAATAATCAAGGAAGAGGTGGTGAAAAAAGTTTTGAAGACTAGCGTGGAGTCCCTGGTTGAGCTTAATATGCTCAAAAACCTTACTGGGTCAGCAGTGGCTGGTGCTCTCGGCGGGTTCAATGCCCATGCAAGCAATATTGTCTCCGCTATCTACATAGCCACTGGTCAGGACCCCGCCCAAAATGTGGAGAGTTCTCACTGCATCACCATGATGGAAGCTGTGAATGACGGCAAGGACCTTCACATCTCCGTCACCATGCCTTCCATTGAGGTGGGTACAGTCGGAGGGGGTACCCAGCTCGCATCCCAGTCAGCTTGTCTTAATTTACTTGGGGTAAAGGGAGCCAGTAAAGAGTCTCCTGGCTCGAATTCTAGGCTTCTAGCCACCATAGTAGCTGGTTCGGTTCTTGCTGGGGAGCTTTCACTCTTGTCTGCCATTGCAGCGGGGCAGCTTGTTCGGAGCCACATGAAATACAACAGATCAAGCAAGGATGTCCCCCAAGTTGTCTCCTGA 1752 0.5257 MDLPRRPLTSHKPPHLPPNKPPSDSPSFPFSPLHFTNALFFSLFFSVSYFLLHRWRDKIRTSTPLHVVTLSEIAAIISFLASVVYLLGFFGIGFLHPLSSRSSSDDDLDLDDDVAIISKDDRRNPGPCPAALLDCSVVNPPTPQLTQKLDVPVPPKSFDDAPPPFSLDDEEIVRSVILGSIPSYSLESKLGNCRRAVAIRREVMQRINGKSLKGLPVEGFDYNSILGQCCEMPIGYVQIPVGVAGPLLLDGVEYTVPMATTEGCLVASTNRGCKAIYVSGGASSILLADGMTRAPVVRFSTVKRAAQLKFFLEDPLNFDSLAVVFNKSSRFARLQSFQCALAGKNVYIRFRCSTGDAMGMNMVSKGVQNVLDYLREGFSDMDVIGVSGNYCSDKKAAAVNWIEGRGKSVVCEAIIKEEVVKKVLKTSVESLVELNMLKNLTGSAVAGALGGFNAHASNIVSAIYIATGQDPAQNVESSHCITMMEAVNDGKDLHISVTMPSIEVGTVGGGTQLASQSACLNLLGVKGASKESPGSNSRLLATIVAGSVLAGELSLLSAIAAGQLVRSHMKYNRSSKDVPQVVS 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g0004 583 Gene3D - 165 239 IPR023282 GO:0004420
Lele51g0004 583 ProSiteProfiles Hydroxymethylglutaryl-coenzyme A reductases family profile. 169 573 IPR002202 GO:0004420|GO:0015936
Lele51g0004 583 FunFam 3-hydroxy-3-methylglutaryl coenzyme A reductase 391 568 - -
Lele51g0004 583 ProSitePatterns Hydroxymethylglutaryl-coenzyme A reductases signature 3. 558 571 IPR023076 GO:0004420
Lele51g0004 583 Gene3D - 290 406 IPR009023 -
Lele51g0004 583 ProSitePatterns Hydroxymethylglutaryl-coenzyme A reductases signature 2. 504 511 IPR023076 GO:0004420
Lele51g0004 583 TIGRFAM HMG_CoA_R_NADP: hydroxymethylglutaryl-CoA reductase (NADPH) 168 573 IPR004554 GO:0004420|GO:0005515|GO:0008299
Lele51g0004 583 Pfam Hydroxymethylglutaryl-coenzyme A reductase 196 573 IPR002202 GO:0004420|GO:0015936
Lele51g0004 583 MobiDBLite consensus disorder prediction 1 24 - -
Lele51g0004 583 Gene3D - 240 568 IPR023074 GO:0004420
Lele51g0004 583 CDD HMG-CoA_reductase_classI 170 573 IPR004554 GO:0004420|GO:0005515|GO:0008299
Lele51g0004 583 PANTHER 3-HYDROXY-3-METHYLGLUTARYL-COENZYME A REDUCTASE 32 577 IPR002202 GO:0004420|GO:0015936
Lele51g0004 583 MobiDBLite consensus disorder prediction 10 24 - -
Lele51g0004 583 FunFam 3-hydroxy-3-methylglutaryl coenzyme A reductase 290 406 - -
Lele51g0004 583 FunFam 3-hydroxy-3-methylglutaryl coenzyme A reductase 165 239 - -
Lele51g0004 583 ProSitePatterns Hydroxymethylglutaryl-coenzyme A reductases signature 1. 349 363 IPR023076 GO:0004420
Lele51g0004 583 SUPERFAMILY NAD-binding domain of HMG-CoA reductase 290 406 IPR009023 -
Lele51g0004 583 PRINTS Hydroxymethylglutaryl-coenzyme A reductase signature 492 513 IPR002202 GO:0004420|GO:0015936
Lele51g0004 583 PRINTS Hydroxymethylglutaryl-coenzyme A reductase signature 347 365 IPR002202 GO:0004420|GO:0015936
Lele51g0004 583 PRINTS Hydroxymethylglutaryl-coenzyme A reductase signature 256 276 IPR002202 GO:0004420|GO:0015936
Lele51g0004 583 PRINTS Hydroxymethylglutaryl-coenzyme A reductase signature 438 464 IPR002202 GO:0004420|GO:0015936
Lele51g0004 583 PRINTS Hydroxymethylglutaryl-coenzyme A reductase signature 229 250 IPR002202 GO:0004420|GO:0015936
Lele51g0004 583 PRINTS Hydroxymethylglutaryl-coenzyme A reductase signature 387 412 IPR002202 GO:0004420|GO:0015936
Lele51g0004 583 SUPERFAMILY Substrate-binding domain of HMG-CoA reductase 164 562 IPR009029 GO:0015936|GO:0016616
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g0004 Lele-ChrLele51 22900 26187 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g0004 4 578 Lipid Metabolism Gene Families AT1G76490 69.565 0.0 814
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g0003 49 29575 32995 Lele51g0004 51 22900 26187 hybridization