Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0927 ATGCAGAAACTGGGCGAGTTCAAGCTACCCCACTTCTTCAATTATCCTCCATACTTCACTTTGCAGCCTGTCAGAGACACAAGGGAGAAGCAAGTACAGTTGTGGAAAGATCTTATTCTAGATTACTGCAAAACGCAGAAGATATTTGTCGTTGGTCTTGATGAAGAATTCGCTCTGTTTTCAAATCCTGCAATTGAAAGGTCTCTCACTCATGAAGCCAGAGAAGCCTTCCTGTCTGCATTAGTTTCAGAAGGACGAGCTGAATGGATGGATAAAGGACGTAAAAAATGTCTTATTCTCTGGCATCGGATTCAAGATTGGGCCGACGTTGTTGTACAATTTGCAAAAGATAATGGATTGGAAGACGGGGTTGTGACAATAGAGGAATTGTGCTCGGGGACTGAATCTCAAGGAACAGAGCTTCATAGGATAGATCGCACCATCTTGAATCGTGCTCTGAAACTGTTGGAACAGAAGGGGAAGCTTGTCATCTTCAAGGGAACTTCAGCGGATGATGAAGGTGTCAAGTTTTCTTTATAG 540 0.4315 MQKLGEFKLPHFFNYPPYFTLQPVRDTREKQVQLWKDLILDYCKTQKIFVVGLDEEFALFSNPAIERSLTHEAREAFLSALVSEGRAEWMDKGRKKCLILWHRIQDWADVVVQFAKDNGLEDGVVTIEELCSGTESQGTELHRIDRTILNRALKLLEQKGKLVIFKGTSADDEGVKFSL 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0927 179 SUPERFAMILY "Winged helix" DNA-binding domain 102 177 IPR036390 -
Lele50g0927 179 Gene3D - 103 178 IPR036388 -
Lele50g0927 179 FunFam vacuolar protein-sorting-associated protein 25 100 178 - -
Lele50g0927 179 FunFam Vacuolar protein sorting-associated protein 25 5 100 - -
Lele50g0927 179 Gene3D - 4 101 IPR014041 -
Lele50g0927 179 Pfam ESCRT-II complex subunit 13 145 IPR008570 GO:0000814|GO:0071985
Lele50g0927 179 SUPERFAMILY "Winged helix" DNA-binding domain 7 107 IPR036390 -
Lele50g0927 179 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS25 2 178 IPR008570 GO:0000814|GO:0071985
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0927 Lele-ChrLele50 5848820 5850878 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele50g0927 50 5848820 5850878 Lele50g0927 50 5848820 5850878 ECH
Lele50g0927 50 5848820 5850878 Lele51g0902 51 5552221 5554232 hybridization
Lele50g0927 50 5848820 5850878 Lele52g0909 52 5879628 5881676 hybridization