Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0650 ATGTGGAAGAGGCCATCTGGATTCTCAACCACTTCCACTGCGGAGCAAGTTACTGAAGGAATCGATGGAAACGGTCTCACTGCCATCGTCATAGGGGCATCAAGTGGTCTTGGTCTTGAAACTGCCCGAGTTCTATCATTGCGTGGTGTTCATGTGGTTATGGCAGTAAGGAATGTGGACTCTGATACAACGGTTATTTTGCTTATGGACAATCAAAGTTTGCTAATATTTTGCATGCAAAAGAGCTTCAAGACGCTTGAAGCCGTTGCTAATGCGATGGGAAAGTTCTTCCTTAAAAATGTTGAGCAGGTAACTTGTCACATTTCATCATTCATGAACATAGATGCAACTCAATGTTATGTGGCATTGCATCCACAAGTGAAGGGAATATCTGGTGAATATTTTATGGATAGCAACAAGGCAAATCCAAGCTCTCAGGCTACGGATTCAGAATTGGCCAGAAAACTCTGGGAATTCAGCTTGAGCCTCACAGATCCAAAGTAG 504 0.4325 MWKRPSGFSTTSTAEQVTEGIDGNGLTAIVIGASSGLGLETARVLSLRGVHVVMAVRNVDSDTTVILLMDNQSLLIFCMQKSFKTLEAVANAMGKFFLKNVEQVTCHISSFMNIDATQCYVALHPQVKGISGEYFMDSNKANPSSQATDSELARKLWEFSLSLTDPK 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0650 167 PANTHER RETINOL DEHYDROGENASE 5 69 - -
Lele49g0650 167 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 20 116 IPR036291 -
Lele49g0650 167 Gene3D - 9 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0650 Lele-ChrLele49 3926924 3930255 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g0650 49 3926924 3930255 Lele49g0650 49 3926924 3930255 ECH
Lele49g0650 49 3926924 3930255 Lele52g0671 52 4246251 4251168 hybridization