Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0527 ATGAGCACCGGCGAGCTTCTTAGCATCGAACCTCTAGAACTCAAGTTTCCCTTTGAGCTGAAGAAGCAGATCTCATGCTCCATTCAATTGTCAAATAAGACCGACAGCTATGTAGCTTTCAAGGTCAAAACAACCAACCCAAAGAAATATTGCGTTCGTCCAAACACTGGAATTGTCTTGCCGCGATCTATGTGTGATGTTATAGTTACCATGCAAGCGCAAAAAGAAGCTCCACCTGATATGCAATGCAAGGATAAATTTCTTCTTCAAAGTGCAAAAACAAATGATGGTACCAACCCAAAGGACATCAATGCAGAAATGTTCAATAAGGAGTCTGGGCATGTGGTTGAGGAGTGCAAATTAAGAGTGCTGTATGTTTCTCCACCTCAACCACCATCTCCAGTTCCCGAAGGTTCAGAGGAAGGATCATCACCCAGGGCCTCTGTTTCAGAAAATGGAAATGTCAGTAGTGCGGACTTTCCCACGGTAACAAAAGCATTTACTGACCGACCTGAGGTTCAAGAAAAATCTGTAGAGACAAAAGGTCTAATCTCAAGGCTGACAGAGGAGAAGAATAATGCAGTTCAACTAAATAACAAGCTTGCCCAGGAACTGGAGCTACTGAAGCGTGAAGCCAACAAAAGTGGCGGTGGAGTCTCTATAGTGATTGTTATCTTAATCGGTTTGCTCGGCATAATTTTGGGTTATCTCATGAAGAAGACCTAA 726 0.4311 MSTGELLSIEPLELKFPFELKKQISCSIQLSNKTDSYVAFKVKTTNPKKYCVRPNTGIVLPRSMCDVIVTMQAQKEAPPDMQCKDKFLLQSAKTNDGTNPKDINAEMFNKESGHVVEECKLRVLYVSPPQPPSPVPEGSEEGSSPRASVSENGNVSSADFPTVTKAFTDRPEVQEKSVETKGLISRLTEEKNNAVQLNNKLAQELELLKREANKSGGGVSIVIVILIGLLGIILGYLMKKT 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0527 241 Gene3D Immunoglobulins 2 130 IPR013783 -
Lele49g0527 241 PANTHER VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN 5 238 IPR016763 GO:0005789
Lele49g0527 241 PIRSF VAMP_assoc_prot 1 240 IPR016763 GO:0005789
Lele49g0527 241 SUPERFAMILY PapD-like 2 141 IPR008962 -
Lele49g0527 241 Pfam MSP (Major sperm protein) domain 7 111 IPR000535 -
Lele49g0527 241 MobiDBLite consensus disorder prediction 143 160 - -
Lele49g0527 241 Coils Coil 184 214 - -
Lele49g0527 241 MobiDBLite consensus disorder prediction 127 160 - -
Lele49g0527 241 FunFam Vesicle-associated protein 1-1 1 129 - -
Lele49g0527 241 ProSiteProfiles Major sperm protein (MSP) domain profile. 6 126 IPR000535 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0527 Lele-ChrLele49 3145195 3148744 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g0527 49 3145195 3148744 Lele49g0527 49 3145195 3148744 ECH
Lele49g0527 49 3145195 3148744 Lele51g0546 51 3214309 3217944 hybridization
Lele49g0527 49 3145195 3148744 Lele52g0556 52 3420610 3426665 hybridization