Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0453 ATGGATTTCTTAGAGCAGGACCTAGATATATTCGGCGAACATTACGATCAGGACCCCGACAAAGAGGCCCGTGACGACCAAGATGGGACTCACTCCTCTTCCCCATCTTCATCCTCCTCGGGTTCTTCTTCTTCGTCCTCTTCATCTGCTTCTTCATCCAACGCCTCTGATTCCTCCAGTGGTAGCGGAAGCGCCAGCAGTGCTGCCGATGAAGACGAAGAGAATGGTGACGAGGTTGAGCATACCAGTAGGGCCTATTATGACCTTGACGAAAAAGACCTGTTTGGTTCTGATAACGAAGATTATTGTAAAACTCCTGCTCAAAGTCCTTACTCGATTCCTGTATTGCCTGCCGTCCGCAATACAAATAATCAGGGTAGGGGGGGTTTTGGCCGTGGCCGTTGGCAGAATGATAGAGGAGCAGGCCTTCTTCCTCGTCCTGGACCTTATCCTCAGAGGCAAAATTTTGGTCATGGAAACAGGTTTTCAAATGGCCGCCATGATGAAAGATTTGTTGCTGAGCTTAAGCTTTCCAAGAGTGAAGAGACTTTGTCAAGAAAGTGTATTGCTATACAGGAGCCATGTGAAATTGCCTGCTATAGTCGCGTAGAAGGTGGAGAGGTCTACTTTGATGATCGCAGCTTGAGGCTTTTTAAGCGTCTTATCACTGAAGATGTTGGAGCTGATTTGAATGAGGGTTATGATACATTTATTGCTAAAAAAGACTTAGGTTCAGAGGGCTTTGGTGATCTTCTTGCTGGCATTAGAGACAAAAATATTCCTCTCCAAAACATTCATTTTGTGACATTTCGTAACAATCTCAACAAGATATTGGCCACTGCTTATATCCGACATGAGCCGTGGGAAATGGGGGTGCATAAAAGGAATGGAGTTGTTTATCTTGATGTGCATAAACTACCAGAAAGAGCACAGAGTGATTTGGATCGCCGGAGATGTTACTGGGGATATTGTTTTGAGAGCCTTGCCACTGAAGATCCTAGGTCTGATGGAGAGGGGATACATCATGTTGATGCCAATGTTGAATATTGTTCTGTGATCAAAACAAAATTAGGGGCTCACCGCATCTTGATGGGTGCTGAGATGGATTGCTGTGATTCAACTGATGATGGAAGGAGATTTTATATTGAACTAAAGACAAGTCGTGAGGTTCATAAAGTCTCAGCTTCCTTGTATCTTATTTTCCCATTACTTCCATCCCATTTCTTCTGGTTTCTTGTTATAGTCATTTTATTGGCTTTTAACAACATGTCGTCTTCAATGATGCAGTTGGAGTATCATACTGAGGAAAAATATGAGAGAGAAAAACTGCTGAAGTTTTGGATTCAGTCATTTTTGGCGGGAGTTCCATATATTGTCATAGGATTCAGAGATGATGCTGGTCGTCTTGTTCGGACAGAAAGACTAAGAACCAAAGAAATCACTCAGAGAATAAAAATGAAGAACTACTGGCAGGGAGGAGTCTGCTTGGCTTTTGCGGATGAAGTTTTATGCTGGCTTTATGGAACAGTCAAGGAGAATGAAGATTACATATTGCAGTTCGCTCCACCTTTCACCCGTTTGGAGCTTCTACAAGGCCAGTCTTGTCCAGATGCAATTACCAGTCATCTTGAGCTGTTGTGA 1641 0.4345 MDFLEQDLDIFGEHYDQDPDKEARDDQDGTHSSSPSSSSSGSSSSSSSSASSSNASDSSSGSGSASSAADEDEENGDEVEHTSRAYYDLDEKDLFGSDNEDYCKTPAQSPYSIPVLPAVRNTNNQGRGGFGRGRWQNDRGAGLLPRPGPYPQRQNFGHGNRFSNGRHDERFVAELKLSKSEETLSRKCIAIQEPCEIACYSRVEGGEVYFDDRSLRLFKRLITEDVGADLNEGYDTFIAKKDLGSEGFGDLLAGIRDKNIPLQNIHFVTFRNNLNKILATAYIRHEPWEMGVHKRNGVVYLDVHKLPERAQSDLDRRRCYWGYCFESLATEDPRSDGEGIHHVDANVEYCSVIKTKLGAHRILMGAEMDCCDSTDDGRRFYIELKTSREVHKVSASLYLIFPLLPSHFFWFLVIVILLAFNNMSSSMMQLEYHTEEKYEREKLLKFWIQSFLAGVPYIVIGFRDDAGRLVRTERLRTKEITQRIKMKNYWQGGVCLAFADEVLCWLYGTVKENEDYILQFAPPFTRLELLQGQSCPDAITSHLELL 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0453 546 MobiDBLite consensus disorder prediction 30 69 - -
Lele49g0453 546 MobiDBLite consensus disorder prediction 1 88 - -
Lele49g0453 546 PANTHER DOM-3 RELATED 29 391 IPR039039 -
Lele49g0453 546 MobiDBLite consensus disorder prediction 7 29 - -
Lele49g0453 546 Pfam RAI1 like PD-(D/E)XK nuclease 427 470 IPR013961 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0453 Lele-ChrLele49 2714272 2718567 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g0453 49 2714272 2718567 Lele49g0453 49 2714272 2718567 ECH
Lele49g0453 49 2714272 2718567 Lele52g0488 52 2964770 2969230 hybridization