Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g1282 ATGGAATCATTGGACGTCATTTCTTTATTCCCCCAGAACACCTTTTCTGAAGAGGGAGGGGGATGGAGAGGGTTTAGAGGGACGAAGTTAGGGCTCTTGGTGAAGATGACGGAAGTGGTTCTGCATATATATGATGTGACCAATAGTGGATCGGACAAGACAAACAACACCATCGTTCAGATCAACAAGATCTTCAGGGATGGGATTGGCCTCGGTGGCATATTTCACAGCGCTGTTCAGGTTTATGGAGACGAAGAATGGTCATTTGGTTTTTGTGAGCAAGGTACAGGAGTTTTCAGCTGCCCTTCACGGAAGAACCCAATGTATACATATCGTGAATCCATTGTTCTTGGGACTACAAACTGTTCAATTTTTAAGGTAAACCAAATATTAAGAGAACTCAGCAGGGAGTGGCCTGGAAGTTCATATGACCTGTTATCCAAAAACTGCAATCATTTTTGCGATGAATTCTGTGAAAATCTTGGTGTGCAAAAACTTCCAGGTTGGGTTAATCGGTTTGCCAACGCTGGGGACACTGCTATGGAGGTGGCTGAAAGTACAGCAATGCGGCTACGGCAAGCCAAAACAGAGATTGTATCAGCAAGTAAAGTAGCATACCGATTCCTCCTAGGTGTTACTAACAATATTAGAAGCGATCCAGACTCGCCAAGCAATTCAAACAGAGGAGGGAGCCCCAGATTTCAGGGTACTTGGTTAAAGAATCTGATTACTACTGGTGCTAAGCCATCAAGTAGTTCAGAAGTCCAATATCAAAATGGGGATGAGCAGCTCCAACAAAGGCCAGAAGATGATGGCAAGGCACTGCTTCGTCATAATTTATCTTCACATGATAGTAGCTGA 861 0.4402 MESLDVISLFPQNTFSEEGGGWRGFRGTKLGLLVKMTEVVLHIYDVTNSGSDKTNNTIVQINKIFRDGIGLGGIFHSAVQVYGDEEWSFGFCEQGTGVFSCPSRKNPMYTYRESIVLGTTNCSIFKVNQILRELSREWPGSSYDLLSKNCNHFCDEFCENLGVQKLPGWVNRFANAGDTAMEVAESTAMRLRQAKTEIVSASKVAYRFLLGVTNNIRSDPDSPSNSNRGGSPRFQGTWLKNLITTGAKPSSSSEVQYQNGDEQLQQRPEDDGKALLRHNLSSHDSS 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g1282 286 Gene3D PPPDE domains 34 205 IPR042266 -
Lele48g1282 286 SMART DUF862_2a 37 192 IPR008580 GO:0008233
Lele48g1282 286 ProSiteProfiles PPPDE domain profile. 37 183 IPR008580 GO:0008233
Lele48g1282 286 PANTHER DESUMOYLATING ISOPEPTIDASE 36 259 IPR008580 GO:0008233
Lele48g1282 286 MobiDBLite consensus disorder prediction 264 286 - -
Lele48g1282 286 MobiDBLite consensus disorder prediction 247 286 - -
Lele48g1282 286 Pfam PPPDE putative peptidase domain 38 184 IPR008580 GO:0008233
Lele48g1282 286 MobiDBLite consensus disorder prediction 247 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g1282 Lele-ChrLele48 17149225 17152573 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele48g1282 48 17149225 17152573 Lele48g1282 48 17149225 17152573 ECH
Lele45g0158 45 1318946 1323638 Lele48g1282 48 17149225 17152573 hybridization
Lele46g0176 46 1066628 1067343 Lele48g1282 48 17149225 17152573 hybridization