Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g0158 ATGTCGGTGTTCGGCGTTCCGATCTCCTGCCCATTCTCCGGATTAGCAAAGTTTAAGCTGCTGAAGTTAGGGCTCTTGGTGAAGATGACGGAAGTGGTTCTGCATATATATGATGTGACCAATAGTGGATCGGACAAGACAAACAACACCATCGTTCAGATCAACAAGATCTTCAAGGATGGGATTGGTCTCGGTGGTGTATTTCACAGCGCCGTTCAGGTTTATGGAGACGAAGAATGGTCATTCGGTTTTTGTGAGCAAGGTACTGGAGTTTTCAGCTGCCCTTCACGGAAGAATCCAATGTATACATATCGTGAATCCATTGTTCTTGGAACTACAAACTGTTCAATTTTCAAGGTAAACCAAATATTAAGAGAACTCAGCAGGGAGTGGCCTGGAAGTTCATATGACCTGTTATCCAAAAACTGCAATCATTTTTGCGATGAATTCTGTGAAAATCTTGGTGTGCAAAAACTTCCAGGCTGGGTTAATCGATTTGCCAATGCTGGGGACACTGCTATGGAAGTGGCTGAAAGTACAGCTATGCGGCTACGGCAAGCCAAAACAGAGATTGTATCAGCAAGTAAAGTAGCATACCGATTCCTCTTAGGTGTTACTAACAATATTAGAAGTGATCCAGACTCGCCAAGTAATTCAAACAGAGGAGGTAGCCCCAGATTTCAGGGAACATGGTTAAAGAATCTGATTACCACTGGTGCTAAACCATCAAGTAGTTCAGAAGTCCAGAATCAATATGGGGATGAGCAGCAGCACCAACAAAGGCCAGAAGATGATGGCAACGCACTGCTTCGTCATAATTCATCTTCACATGATAGTAGTTGA 843 0.4353 MSVFGVPISCPFSGLAKFKLLKLGLLVKMTEVVLHIYDVTNSGSDKTNNTIVQINKIFKDGIGLGGVFHSAVQVYGDEEWSFGFCEQGTGVFSCPSRKNPMYTYRESIVLGTTNCSIFKVNQILRELSREWPGSSYDLLSKNCNHFCDEFCENLGVQKLPGWVNRFANAGDTAMEVAESTAMRLRQAKTEIVSASKVAYRFLLGVTNNIRSDPDSPSNSNRGGSPRFQGTWLKNLITTGAKPSSSSEVQNQYGDEQQHQQRPEDDGNALLRHNSSSHDSS 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g0158 280 MobiDBLite consensus disorder prediction 209 256 - -
Lele45g0158 280 Pfam PPPDE putative peptidase domain 31 177 IPR008580 GO:0008233
Lele45g0158 280 ProSiteProfiles PPPDE domain profile. 30 176 IPR008580 GO:0008233
Lele45g0158 280 SMART DUF862_2a 30 185 IPR008580 GO:0008233
Lele45g0158 280 MobiDBLite consensus disorder prediction 209 280 - -
Lele45g0158 280 PANTHER DESUMOYLATING ISOPEPTIDASE 29 260 IPR008580 GO:0008233
Lele45g0158 280 MobiDBLite consensus disorder prediction 257 280 - -
Lele45g0158 280 Gene3D PPPDE domains 27 198 IPR042266 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g0158 Lele-ChrLele45 1318946 1323638 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele45g0158 45 1318946 1323638 Lele45g0158 45 1318946 1323638 ECH
Lele45g0158 45 1318946 1323638 Lele48g1282 48 17149225 17152573 hybridization