Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g1273 ATGGCTCTAGCTCCTCTTCCAAAAGTGATTCTAGGTTCATTTGCGTTTGCATTCTTCTGGGTGTTAGCAGTTTTCCCTGCTGTGCCTTTCCTTCCCATAGGGAGAACTGCAGGATCCCTTTTAGGTGCCTTGCTTATGGTCATCTTCCAAGTTCTATCTCCAAATCAAGCTTATGCCGCCATTGATCTAGCAATTCTGGGTCTTCTTTTTGGGACAATGGTCGTGAGTGTATATCTTGAGAGAGCAGACATGTTCAAGTACTTGGGCAAGTTACTGTCTTGGAAAAGTAAAGGGGCAAAGGATTTACTTTGTAGAATCTGTCTGATTTCTGCTATTTCAAGTGCACTCTTCACTAATGATACGTCTTGTGTTGTTTTGACTGAATTTGTACTGAAAGTTGCAAGGCAGCATAATTTGCCTCCACATCCATTGCTCCTTGCTCTTGCTTCAAGTGCTAATATTGGGTCCTCTGCAACACCAATAGGTAACCCCCAAAATCTGGTAATTGCTGTTCAAAGTGGCATATCATTTGGTGGATTCTTGATTGGGATTCTTCCTGCTATGCTTGTGGGGATTGTTGTGAATGCTTTGATTCTTCTGTTCATTTATTGGAAGTTATTGTCTACTCATAAGGATGAAGAAGATGTTTCTGTAGAGTTTGTAGCAGAAGAGGAAGTTAATTCTCATAGGTTTTCTCCAGCCACTATGTCTCACTTGACATCCTTCAATTCTCAAGAATCGAACTATTTAGAATCCGTCAGCATCCAAAACTCACCTCAGGTTCTGAGAAACCGTGGAAACACAGGTGAAGCTCATTTGGCCTCCAACAGCAACGCAGTGGATTCTGCAACAAGCTCAAATACATTAAAGGATGATATCAATGGCATGAATTCTCAGACAAGAGAGGAAAACAGCCATTCAGAGGCATTTGCAGCAGCAGATAGAGCAAGTGATGATACAAACTTTTTTGAAAGAAATGAGTTTTTAAACCCGAAATGGAAACAAATGCTCTGGAAGGCTTGTGTTTACATGATCACATTAGGAATGTTAGTTGCTTTGCTAGTGGGAATGAATATGTCATGGACTGCAATTACTGCTGCACTTGCTTTGGTGGTTCTTGATTTCAAGGATGCTAGGCCAAGCTTAGAGAAGGTTTCATATTCACTTTTGATATTCTTCTGTGGAATGTTTATCACGGTAGATGGCTTCAATAAAACTGGAATTCCAAGTTCCTTTTGGGAATTGGTGGAGCTCTATTCTAAAGTAGATAGTGCCAGTGGAATAGCAGTACTTGCCTTAGTCATACTTGTCCTCTCAAATTTGGCTTCAAATGTACCAACAGTTCTGTTGCTGGGGGCGAGGATTGCAGCATCAGCGGCTGCAATCTCAGGTGAAGAAGAGAAGAAGGCGTGGCTCATATTAGCATGGGTGAGCACAGTGGCAGGGAATCTGTCCCTCTTGGGATCAGCAGCGAACTTGATAGTGTGTGAGCAAGCTCGCAGAGCACCAGAGCTTGCTTATAATTTGACCTTCTGGAACCATCTCAAGTTTGGACTCCCTTCTACTCTTGTTGTCACCGCCATCGATGAAACTGTCTTAGCTCGGAGATACTCTCTCTCTCTCCTATCTCCCCCTCTCATTGTATTTTATAGGTTTTGTTTGGGCGCTCGCGAAGTTCTGAACGACTCAGGAATGTTCTTACTCAGATTTGAGCTAAAATTATTCAGAGGGTTGAGTTCAGATTCACACCGTTCCATTGAGTGTTGA 1767 0.4244 MALAPLPKVILGSFAFAFFWVLAVFPAVPFLPIGRTAGSLLGALLMVIFQVLSPNQAYAAIDLAILGLLFGTMVVSVYLERADMFKYLGKLLSWKSKGAKDLLCRICLISAISSALFTNDTSCVVLTEFVLKVARQHNLPPHPLLLALASSANIGSSATPIGNPQNLVIAVQSGISFGGFLIGILPAMLVGIVVNALILLFIYWKLLSTHKDEEDVSVEFVAEEEVNSHRFSPATMSHLTSFNSQESNYLESVSIQNSPQVLRNRGNTGEAHLASNSNAVDSATSSNTLKDDINGMNSQTREENSHSEAFAAADRASDDTNFFERNEFLNPKWKQMLWKACVYMITLGMLVALLVGMNMSWTAITAALALVVLDFKDARPSLEKVSYSLLIFFCGMFITVDGFNKTGIPSSFWELVELYSKVDSASGIAVLALVILVLSNLASNVPTVLLLGARIAASAAAISGEEEKKAWLILAWVSTVAGNLSLLGSAANLIVCEQARRAPELAYNLTFWNHLKFGLPSTLVVTAIDETVLARRYSLSLLSPPLIVFYRFCLGAREVLNDSGMFLLRFELKLFRGLSSDSHRSIEC 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g1273 588 PANTHER TRANSPORTER ARSB-RELATED 1 534 - -
Lele48g1273 588 MobiDBLite consensus disorder prediction 275 303 - -
Lele48g1273 588 CDD YbiR_permease 28 528 - -
Lele48g1273 588 Pfam Citrate transporter 31 481 IPR004680 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g1273 Lele-ChrLele48 17081651 17089199 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele48g1273 48 17081651 17089199 Lele48g1273 48 17081651 17089199 ECH
Lele45g0170 45 1398917 1401484 Lele48g1273 48 17081651 17089199 hybridization
Lele46g0187 46 1140279 1143011 Lele48g1273 48 17081651 17089199 hybridization