Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g0187 ATGGCTCTAGCTCCTCTTCCAAAAGTGATTCTAGGTTCCTTTGCGTTTGCAATCTTCTGGGTGTTAGCAGTTTTCCCTGCTGTGCCTTTCCTTCCCATAGGGAGAACTGCAGGGTCCCTTTTAGGTGCCTTGCTTATGGTCATCTTTCAAGTTCTATCTCCAAATCAAGCTTATGCCGCCATTGATCTAGCAATTCTGGGTCTTCTTTTTGGGACAATGGTTGTGAGTGTATATCTTGAGAGAGCAGACATGTTCAAGTACTTGGGCAAGTTACTGGCTTGGAAAAGTAAAGGGGCAAAGGACTTACTTTGTAGAATCTGTCTGATTTCTGCTATTTCAAGTGCTCTCTTCACTAATGATACGTCTTGTGTTGTTTTGACTGAATTTGTATTGAAAGTTGCAAGGCAGCATAATTTGCCTCCACATCCATTGCTCCTTGCTCTTGCTTCAAGTGCTAATATTGGGTCCTCTGCAACACCAATCGGCAACCCCCAAAATCTGGTAATTGCTGTTCAAAGTGGCATATCATTTGGTGGATTCTTGATTGGGATTCTTCCTGCTATGCTTGTGGGGATTGTTGTGAATGCTTTGATTCTTCTGTTCATTTATTGGAAGTTATTGTCTGCTCATAAGGATGAAGAAGATGTTTCTGTAGAAGTTGTAGCAGAAGAGGAAGTTAATTCTCATAGGTTTTCTCCAGCCACTATGTCTCACTTGACATCCTTCAATTCTCAAGAATCGAACTATTTAGAATCTGTCAGCATCCAAAACTCTCCTCAGGTTCTGAGAAACCGTGGAAACACGGTTGAAGCTCATTTGGCCTCCAACAGCAACACAGTGGATTCTGCAAGAAGCTCAAATGCATTAAAGGATGATATCAAAGGCATGAATTCTCAGACAAGAGAGGAAAACAGCCATTCAGAGGCATTTGCAGTAGCAGATAGAGCAAGTGATGATACAAACTTTTTCGAAGGAAATGAATTTTTAAACCCGAAATGGAAACAAATGCTCTGGAAAGCTTGTGTTTACATGATCACATTAGGAATGTTAGTTGCTTTGCTAGTGGGAATGAATATGTCATGGACTGCAATTACTGCTGCACTTGCTTTGGTGGTTCTTGATTTCAAGGATGCTAGGCCAAGCTTAGAGAAGGTTTCGTATTCACTTTTGATATTCTTCTGTGGAATGTTTATCACGGTAGATGGCTTCAATAAAACTGGAATTCCAAGTTCCTTTTGGGAATTGGTGGAGCCCTATTCTAAAGTAGATAGTGCCAGTGGAATAGCAGTACTTGCCTTAGTCATACTTGTCCTCTCAAATTTGGCTTCAAATGTACCAACAGTTCTGTTGCTGGGGGCGAGGATTGCAGCATCAGCGGCTGCAATCTCAGGTGAAGAAGAGAAGAAGGCGTGGCTCATATCAGCATGGGTGAGCACAGTGGCAGGGAATCTGTCCCTCTTGGGATCAGCAGCGAACTTGATAGTGTGTGAGCAAGCTCGCAGAGCACCAGAGCTTGCTTATAATTTGACCTTCTGGAACCATCTCAAGTTTGGACTCCCTTCTACTCTTGTGGTCACCGCCATCGGTTTGATACTTATCAGATGA 1605 0.4268 MALAPLPKVILGSFAFAIFWVLAVFPAVPFLPIGRTAGSLLGALLMVIFQVLSPNQAYAAIDLAILGLLFGTMVVSVYLERADMFKYLGKLLAWKSKGAKDLLCRICLISAISSALFTNDTSCVVLTEFVLKVARQHNLPPHPLLLALASSANIGSSATPIGNPQNLVIAVQSGISFGGFLIGILPAMLVGIVVNALILLFIYWKLLSAHKDEEDVSVEVVAEEEVNSHRFSPATMSHLTSFNSQESNYLESVSIQNSPQVLRNRGNTVEAHLASNSNTVDSARSSNALKDDIKGMNSQTREENSHSEAFAVADRASDDTNFFEGNEFLNPKWKQMLWKACVYMITLGMLVALLVGMNMSWTAITAALALVVLDFKDARPSLEKVSYSLLIFFCGMFITVDGFNKTGIPSSFWELVEPYSKVDSASGIAVLALVILVLSNLASNVPTVLLLGARIAASAAAISGEEEKKAWLISAWVSTVAGNLSLLGSAANLIVCEQARRAPELAYNLTFWNHLKFGLPSTLVVTAIGLILIR 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g0187 534 CDD YbiR_permease 28 533 - -
Lele46g0187 534 Pfam Citrate transporter 27 481 IPR004680 GO:0016020|GO:0055085
Lele46g0187 534 PANTHER TRANSPORTER ARSB-RELATED 1 534 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g0187 Lele-ChrLele46 1140279 1143011 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele45g0170 45 1398917 1401484 Lele46g0187 46 1140279 1143011 ECH
Lele46g0187 46 1140279 1143011 Lele46g0187 46 1140279 1143011 ECH
Lele46g0187 46 1140279 1143011 Lele48g1273 48 17081651 17089199 hybridization