Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g1188 ATGGAGTCGGTTCTAACTCCTGTTGGTTCTGGCCCCTTCTGCCACACCCCAGCTTCATCCAAGAGACGAATTGCGGGTGCCCGTTTCAATTGTTGCTCATTTGCTGGTCGTGTTCATGGCGTTGGCGCCCCTAAACGCATCTTTTTGGTGAAGGCAGAGGGTGTGGGTATCAACCCAGATATCAGGAAGAGCGAAGAGAAAGTGGTGGATTCTGTCGTCGTCACTGAGCTCTCTAAGCCCCTCACTCCTTATTGCAGATGTTGGAGATCTGGGACGTTCCCACTTTGTGATGGAAGCCATGTAAAGCACAACAAAGCCACAGGGGATAATGTTGGGCCTCTTCTCTTGAAGAAGTGA 357 0.5098 MESVLTPVGSGPFCHTPASSKRRIAGARFNCCSFAGRVHGVGAPKRIFLVKAEGVGINPDIRKSEEKVVDSVVVTELSKPLTPYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLKK 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g1188 118 PANTHER CDGSH IRON-SULFUR DOMAIN-CONTAINING PROTEIN 1 47 118 IPR045131 GO:0010506|GO:0051537
Lele48g1188 118 SMART znf_cdgsh 67 106 IPR018967 GO:0043231|GO:0051537
Lele48g1188 118 Pfam Iron-binding zinc finger CDGSH type 74 100 IPR018967 GO:0043231|GO:0051537
Lele48g1188 118 Gene3D - 73 118 IPR042216 -
Lele48g1188 118 FunFam CDGSH iron-sulfur domain-containing protein 1 73 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g1188 Lele-ChrLele48 16385715 16387698 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele48g1188 48 16385715 16387698 Lele48g1188 48 16385715 16387698 ECH
Lele45g0261 45 2117763 2119498 Lele48g1188 48 16385715 16387698 hybridization
Lele46g0284 46 1850681 1852878 Lele48g1188 48 16385715 16387698 hybridization