Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g0284 ATGAATAGTATAGATATGAGGCCAGCAAAATTTACACGAAATGGAAATAAAACTGAAAAATTCAATGCACACCAACCTTTCTTATTTCACGTGGCACGCTTAGCGTTCTTGCCCTCCGATATCTCATCCTCAAGGAGCGTGTGCCTCCCACAGGTCAAGTATCACTCCCAATCCAATCTCGCTCTGTTATCTCTCATCCGCCCCGCAAGAGAGAGGCTAATAATGGAGTCGGTTCTAAGTCCTGTTGGTTCTGGCCTCTTCTGCCACGCCACAGCTTCATCCAAGAGACGAATTGCGGGTGCCCATTTCAATTCCTGCTCATTTGCTGGTCGTGTTCATGGCGGTGGCGCCCCTAAACGCATCGTTTTGGTGAAGGCAGAGGGTGTGGGTATCAACCCAGATATCAGGAAGAGCGAAGAGAAAGTGGTGGATTCTGTCGTCGTCACTGAGCTCTCTAAGCCCCTCACTCCTTATTGCAGATGTTGGAGATCTGGGACGTTCCCACTGTGTGATGGAAGCCATGTAAAGCACAACAAAGCCACAGGGGATAATGTTGGGCCTCTTCTCTTGAAGAAGTGA 579 0.4888 MNSIDMRPAKFTRNGNKTEKFNAHQPFLFHVARLAFLPSDISSSRSVCLPQVKYHSQSNLALLSLIRPARERLIMESVLSPVGSGLFCHATASSKRRIAGAHFNSCSFAGRVHGGGAPKRIVLVKAEGVGINPDIRKSEEKVVDSVVVTELSKPLTPYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLKK 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g0284 192 FunFam CDGSH iron-sulfur domain-containing protein 1 147 192 - -
Lele46g0284 192 Pfam Iron-binding zinc finger CDGSH type 148 174 IPR018967 GO:0043231|GO:0051537
Lele46g0284 192 SMART znf_cdgsh 141 180 IPR018967 GO:0043231|GO:0051537
Lele46g0284 192 Gene3D - 147 192 IPR042216 -
Lele46g0284 192 PANTHER CDGSH IRON-SULFUR DOMAIN-CONTAINING PROTEIN 1 125 192 IPR045131 GO:0010506|GO:0051537
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g0284 Lele-ChrLele46 1850681 1852878 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele46g0284 46 1850681 1852878 Lele46g0284 46 1850681 1852878 ECH
Lele46g0284 46 1850681 1852878 Lele47g1126 47 16866903 16868587 hybridization
Lele46g0284 46 1850681 1852878 Lele48g1188 48 16385715 16387698 hybridization