Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g0172 ATGGGGAAAGGAGGCGGGTGTGTACCTAGCAAGAAGAAGGCGCCCATTTCTGATTCGAAGAAGAATGATCCTGTTTCAGAGAGCATCGAAACCCAATCGCGAGTAACGGAAACGACAACTATCGCAGTCCGAGAAGCGCCGCTCGAAGCTGAAGCGAAGAAGATGAGGGTTTTCATTGTGTATTACTCAATGTACGGTCATGTGGAGTCACTGGCGCGGGAAATAAAGAAAGGTGTGGATTCGGTAGAAGGAGTGGAAGGCGTGTTGTACCGAGTGACGGAGACGCTGCCGAAGGAGGTGCTAGAGATGATGAAGGCGCCGCCGAAGGAGGATAGCGTTCCGGTGATAACGGCGGAGAAATTGGTGGAGGCGGATGGGGTGATATTCGGGTTCCCGACGAGATTCGGAAGCATGGCGGCGCAGATGAAGGCTTTTTTCGATTCAACGGGGCAGTTATGGAGGGAACAGAAGCTGGCGGGAAAACCAGCTGGCTTCTTTGTGAGTACCGGCACACAAGGCGGTGGCCAAGAAACGACCGCGTGGACGGCAATTACACAGTTAGTGCACCATGGGATGATATACGTTCCAGTGGGATATACATTAGGAGCTGGAATGTTTGAAATGGAATCAATTAGAGGAGGGTCTCCTTATGGGGCTGGCGTTTTCGCTGGAGATGGAACCAGACAAGCTACTGATAAAGAGCTTGCTCTTGCTGAGCATCAGGGCAAGTACATGGCTACCACCGTCAAGAAATTGGCTCTCACTCCCTAA 771 0.5188 MGKGGGCVPSKKKAPISDSKKNDPVSESIETQSRVTETTTIAVREAPLEAEAKKMRVFIVYYSMYGHVESLAREIKKGVDSVEGVEGVLYRVTETLPKEVLEMMKAPPKEDSVPVITAEKLVEADGVIFGFPTRFGSMAAQMKAFFDSTGQLWREQKLAGKPAGFFVSTGTQGGGQETTAWTAITQLVHHGMIYVPVGYTLGAGMFEMESIRGGSPYGAGVFAGDGTRQATDKELALAEHQGKYMATTVKKLALTP 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g0172 256 ProSiteProfiles Flavodoxin-like domain profile. 57 245 IPR008254 GO:0010181
Lele48g0172 256 TIGRFAM flav_wrbA: NAD(P)H:quinone oxidoreductase, type IV 56 252 IPR010089 GO:0003955|GO:0010181
Lele48g0172 256 MobiDBLite consensus disorder prediction 1 35 - -
Lele48g0172 256 FunFam NAD(P)H dehydrogenase (Quinone) FQR1-like 53 254 - -
Lele48g0172 256 Gene3D - 52 253 IPR029039 -
Lele48g0172 256 Pfam NADPH-dependent FMN reductase 69 198 IPR005025 GO:0016491
Lele48g0172 256 PANTHER FLAVODOXIN-RELATED PROTEIN WRBA-RELATED 55 252 - -
Lele48g0172 256 SUPERFAMILY Flavoproteins 55 252 IPR029039 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g0172 Lele-ChrLele48 1917220 1918373 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele45g1243 45 22426155 22428190 Lele48g0172 48 1917220 1918373 hybridization
Lele46g1334 46 20440528 20445587 Lele48g0172 48 1917220 1918373 hybridization