Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g1334 ATGCCTCTCATTTTTTTAATGTTCTTTTCTGTTGAATTGTACTTAATGCAGATGGTTTATGCTCAATGTTCATGTTGCTATATGCAGATGGAAATAGAATGTATATTCCAGAAAGTGAAATCGGTTGACGACACTACAGAGAATGTAACTTTCTATCTCAATGTGTATGATTTGACACCCGCAAACGGTTACTTGTACTGGGCAGGCCTTGGTGTTTTTCATGCTGGGGTTGAAGTTTATGGAGCCCACGATTGTCCTACTAGCGGTGTCTTTGACGTTGAACCTCGGCAGTGCCCTGGGTTCAAGTTTAGGAAGTCAATATTCACGGGAACGACGAATTTGAGTTCATTCAAGATGAGAGAATTCACGAAGCATCAGTCAGCTAACTACCATGTAAACACATCAAAAGCATCTCAGAAATTATTCTGGAATTCAATACCTGATTCATGGTTCGTTGTAATCCTTATATTTGGCAATTGCAATGCGGACTGGTTCAAAGATGAAGCTAAATATTCCTTCATAAAATTTGGGTTTTCTAAGGTGAAATTTGGTCCTCTGAAAACCACTACGTTTGATGTGGCGAGTGGTAGTGTAAAAAAAAAATTAACAACAATGGGGAAAGGAGGCGGGTGTGTACCTAGCAAGAAGAAGGCGCCCATTTCTGATTCGAAGAAGAATGATCCTGTTTCAGAGAGCATCGACACCCAATCGCGAGTAACGGAAACGACAACTATCGCAGTCCGAGAAGCGCCGATCGAAGCTGAAGCGAAGAAGATGAGGGTTTTCATTGTGTATTACTCAATGTACGGTCATGTGGAGTCACTGGCGCGGGAAATAAAGAAAGGTGTGGATTCGGTAGAAGGAGTGGAAGGCGTGTTGTACCGAGTGACGGAGACGCTGCCGAAGGAGGTGCTAGAGATGATGAAGGCGCCGCCGAAGGACGATAGCGTTCCGGTGATAACGGCGGAGAAATTGGTGGAGGCGGATGGGGTATTATTCGGGTTCCCGACGAGATTCGGAAGCATGGCGGCGCAGATGAAGGCGTTTTTCGATTCAACGGGGCAGTTATGGAGGGAACAGAAGCTGGCGGGAAAACCTGCTGGCTTCTTTGTGAGTACCGGCACACAAGGCGGTGGCCAAGAAACGACCGCGTGGACGGCAATTACACAGTTAGCGCACCATGGGATGATATACGTTCCAGTGGGATATACATTAGGAGCTGGAATGTTTGAAATGGAATCAATTAGAGGAGGGTCTCCTTATGGTGCTGGCGTTTTCGCTGGAGATGGAACCAGACAAGCTACTGATAAAGAGCTTGCTCTTGCTGAGCATCAGGGCAAGTACATGGCTACCACCGTCAAGAAATTGGCTCTCACTTCCTAA 1383 0.4591 MPLIFLMFFSVELYLMQMVYAQCSCCYMQMEIECIFQKVKSVDDTTENVTFYLNVYDLTPANGYLYWAGLGVFHAGVEVYGAHDCPTSGVFDVEPRQCPGFKFRKSIFTGTTNLSSFKMREFTKHQSANYHVNTSKASQKLFWNSIPDSWFVVILIFGNCNADWFKDEAKYSFIKFGFSKVKFGPLKTTTFDVASGSVKKKLTTMGKGGGCVPSKKKAPISDSKKNDPVSESIDTQSRVTETTTIAVREAPIEAEAKKMRVFIVYYSMYGHVESLAREIKKGVDSVEGVEGVLYRVTETLPKEVLEMMKAPPKDDSVPVITAEKLVEADGVLFGFPTRFGSMAAQMKAFFDSTGQLWREQKLAGKPAGFFVSTGTQGGGQETTAWTAITQLAHHGMIYVPVGYTLGAGMFEMESIRGGSPYGAGVFAGDGTRQATDKELALAEHQGKYMATTVKKLALTS 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g1334 460 Pfam PPPDE putative peptidase domain 51 132 IPR008580 GO:0008233
Lele46g1334 460 Pfam NADPH-dependent FMN reductase 273 402 IPR005025 GO:0016491
Lele46g1334 460 ProSiteProfiles PPPDE domain profile. 49 192 IPR008580 GO:0008233
Lele46g1334 460 PANTHER FLAVODOXIN-RELATED PROTEIN WRBA-RELATED 259 456 - -
Lele46g1334 460 MobiDBLite consensus disorder prediction 209 235 - -
Lele46g1334 460 ProSiteProfiles Flavodoxin-like domain profile. 261 449 IPR008254 GO:0010181
Lele46g1334 460 Gene3D PPPDE domains 44 136 IPR042266 -
Lele46g1334 460 TIGRFAM flav_wrbA: NAD(P)H:quinone oxidoreductase, type IV 260 456 IPR010089 GO:0003955|GO:0010181
Lele46g1334 460 Gene3D - 256 457 IPR029039 -
Lele46g1334 460 SUPERFAMILY Flavoproteins 259 456 IPR029039 -
Lele46g1334 460 SMART DUF862_2a 49 167 IPR008580 GO:0008233
Lele46g1334 460 FunFam NAD(P)H dehydrogenase (Quinone) FQR1-like 257 458 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g1334 Lele-ChrLele46 20440528 20445587 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele46g1334 46 20440528 20445587 Lele47g0166 47 1192759 1195161 hybridization
Lele46g1334 46 20440528 20445587 Lele48g0172 48 1917220 1918373 hybridization