Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g0108 ATGGCAAAAAACATTTGTGTTTGGGGTGAAGATTACAAACCACTCACCTTTCGACCCCTTTTTTGTGCTCTGTCTTCCTTTCTCCTCCTTCCATTTTCTTGGCAGTTGGAAGCCGTTTCTCTGCTTCGTGCCTTCATCACCATCAAAATGGAGATGGCTAGTAAACTCCTACTTCAAACTCGTTTTCTCCACAACACTCTCTTCAAGAACCCTTGTACTTCATCATCACTTCCTCAATCTTCAACCGCCGTGTTCTCCAATCACCAACACCTCCATTCATCCCCACCTTCATTTCACATTCCTACTTTCCCTTCAAATCTATTCCTCAAAACTTCCAGGACGCATCGCCATTTGTTCGTCACCACTTGCGCTAATCGGAATCCTGAACTCATTGATGATAGCCGCAAAACTTCTGTCGAAAATGAGGATTATGTGGATGAGAATTCTCAAGAACAAGAAGGCGAAGTTGAAGTGGTGGGAGAGGTTCAGAAGACGGAACTCGCTGACCAGAGCATATGGAACCAGATGAAGCAAATTGTCATGTTTGCAGGACCAGCAACGGGACTTTGGGTATGCGGACCCCTAATGAGTCTCATTGATACGGCTGTTATTGGTCAGGGAAGCTCGATTGAGCTAGCTGCCTTAGGCCCTGCTACAGTTGTGTGTGATCACATGAGTTTCGTGTTCATGTTTCTCTCAATTGCGACTTCTAACATGGTTGCCACTGCGCTTGCTAAACAGGATAGAGACGAAGTACAGCATCACATCTCTAACTTGCTTTTAGTTGGGTTAGCTTGTGGCTTCGCGATGCTTTTGTTCACAAGATTCTTCGGTGCATCAATTCTTACTGCTTTTACTGGGCAAAATAATTTACGTGTGGTGCCTGCCGCAAACACTTATGTCAAGATACGAGGCTTGTCATGGCCTGCATTACTTGTCGGATGGGTTGCTCAAAGCGCTAGTCTTGGTATGAAGGATTCCTGGGGACCCTTGAAGTCTTTGGCCGCTGCTAGTGCTATAAATGTCGTTGGTGCTGTAGTTTTGTGTATTTATCTGGGCTATGGCATTGCGGGGGCCGCATGGGCTACAATGGCAGCACAAGTTGTTGCGGGGTACATGATGCTTCAGACTCTAAAAGAGAAGGGATATAATGCATATGCCCTCTCCATTCCTTCAGCCCAAGAGTTTTTTTCAATTGTTGGGCTTGCTACCCCTGTATTTTTGACACTGATGTCAAAGGTTGGCTTCTACTCACTACTTATATATTTTGCCACATCAATGGGCACACATACAATGGCTGCTCATCAAGTCATGGTTCAAACCTTCTGCTCATGTACAGTATGGGGTGAACCTCTCTCGCAAACTGCCCAATCATTTATGCCCGAATTGATTTATGGCAGTAAAAAGAGTTTGGCAAAGGCTAGAGGTCTTCTAAGGTCTCTAGTAATAATTGGAGCGACACTCGGATTGCTGTTAGGAATTGTTGGGACATCAGTTCCTTGGTTGTTCCCCAAAATTTTTACCCCCGATCAGATGATTATCCAGGAGATGCACAAGGTGCTGATTCCATACTTCATAGCGCTTGCTATAACACCCCCTACACTTTGCCTTGAAGGAACATTGCTGGCTGGACGCGATCTAAGATATATAAGTTTATCAATGGGTGGATGCTTCACCTTTGGTGCATTTATACTATTGATACTGAGCAGCAGATTTGGCTTGCAAGGTTGCTGGCTCGGTTTTCGATGGCCCTCCAGCGCCTTCTTTCGCCCAATGGCGTGTTTTCTGAAGATTTTGAGCAGTATAAGCAACTCAAGGCTGCATAGGTTGGTCTACACATCTAAAAGGTTGATGAGCAGTCGCTCCAATGGAAGAGTTTTCGCCTCATGTTTCAGAGGTTTCGGGCTCAAAACCGGCATCGACATGATTCTAATTACAGACCACTCGCTTTTCAACCCTTTCTCTTCCTTCCATTGTCTCACAAGTTGGAATCGGAAGCCACTTTTCTGCTTCACTCCTTCTTCACCATCAAAATCAGAGATGGCTTGTAAGCTCCTACTTCAAACTCGCTTTCTTCACAACACTCTCTTCAAGAACCCTTGTACGTCATCATTACTTCCTCAATCTTCAATCGCCTCGTTCTCCAATCACCAACACCTCCATTCATCCCCATCGTCAAATCTATTCCTCAAAACTTCCAGGACGCATCGCGATTGGTTCGTCACCACTTGCGCTAATCGGAATCCTGAGGTCATTGATGATAGCCGCGAAACTTCTGCAGCAAATGAGGATCATATGGATGAGAATTCTCGAGAACAAGAAGGTGAAGTTGAAGTGGTGGGAGAGGTTGAGAAGACGGAACTGACTCACCAGAGCATATGGGGTCAGATTAAGGAAATTGTCAGGTTTACAGGACCAGCAACGGGACTTTGGATATGCGGACCACTAACGAGTCTCATGGATACGGCTGTTATTGGTCAAGGAAGCTCGATTGAGCTAGCTGCCTTAGGCCCTGCCACAGTTGTGTGTGATTACATGAGTTACTTGTTCATGTTTCTCTCGATTGCAACTTCTAACATGGTTGCTACTGCGCTTGCTAAACAGGATAGAGACGAAGTACAGCATCACATCTCTGTCTTGCTTTTAGTTGCGTTAGCTTGTGGCTTCGTGATGGTTTTGTTCACAAAATTCTTTGGTGCATCAATGCTCACTGCTTTTACCGGGTCCAAGAATTTGCATCTAGTGCCTGCGGCAAACACTTATGTCCAGATTCGAGGCTTGTCATGGCCTGCATTATTTGTCGGATGGGTTGCTCAAAGCGCTAGTCTTGGTATGAAGGATTCCTGGGGACCCTTGAAGGCTTTGGCCGTTGCTAGTGCTATCAATGGCATTGGTGCTGTAATTTTGTGTATTTATCTGGGCTATGGTATTGCAGGGGCCGCATGGGCTGCAATGGCATCACAAGTTTTTGCGGGGTACATGATGCTTCAGACTCTAAAAGAGAAGGGATATAATGCATATGCCCTCTCCATTCCATCGGCCCAAGAGTTTTTTTCTATAGTTGGGCTTGCTACCCCTGTATTTTTGACACTGATGTCAAAGGTGTGTTTCTACTCACTACTTATATATTTTGCCACATCAATGGGCACAAATACAATGGCTGCTCATCAAGTCATGGCTCAAACCTTCTACACATGTTCAGTATGGGGTGAACCTCTCTCTCAAACTGCCCAATCATTTATGCCCGAATTGATTTATGGCCTTAAACGGAGTTTGGCAAAGGCTAGAGGTCTTCTAAGGTCCTTAGTAATAATTGGAGCAACCCTCGGATTGCTGTTAGGAACTGTTGGGACATCAGTTCCTTGGTTATTCCCCAAAATTTTTACCCCCGATCAGATGGTCATCCAAGAGATGCACAAGGTGCTGATTCCATACTTCATAGCGCTTGCTATAATGCCTGCTACTCTTAGCCTTGAAGGAACATTGCTGGCTGGACGCGATCTAAGATTTATAAGTTTATCAATGAGCGGATGCTTCACCTTTGGTGCATTTTTACTATTGATACTGAGCAGAAGATTTGGCTTGCAAGGCTGCTGGTTTGCACTCGCAGCTTTTCAATGGGCTCGGTTTTCAATGGCCCTCCAACGCCTTCTTTCGCCCAATGGCATGTTATACTCTGAAGATTTTGAGCAGTATAAGCAACTCAAAGCTGCATAG 3717 0.4522 MAKNICVWGEDYKPLTFRPLFCALSSFLLLPFSWQLEAVSLLRAFITIKMEMASKLLLQTRFLHNTLFKNPCTSSSLPQSSTAVFSNHQHLHSSPPSFHIPTFPSNLFLKTSRTHRHLFVTTCANRNPELIDDSRKTSVENEDYVDENSQEQEGEVEVVGEVQKTELADQSIWNQMKQIVMFAGPATGLWVCGPLMSLIDTAVIGQGSSIELAALGPATVVCDHMSFVFMFLSIATSNMVATALAKQDRDEVQHHISNLLLVGLACGFAMLLFTRFFGASILTAFTGQNNLRVVPAANTYVKIRGLSWPALLVGWVAQSASLGMKDSWGPLKSLAAASAINVVGAVVLCIYLGYGIAGAAWATMAAQVVAGYMMLQTLKEKGYNAYALSIPSAQEFFSIVGLATPVFLTLMSKVGFYSLLIYFATSMGTHTMAAHQVMVQTFCSCTVWGEPLSQTAQSFMPELIYGSKKSLAKARGLLRSLVIIGATLGLLLGIVGTSVPWLFPKIFTPDQMIIQEMHKVLIPYFIALAITPPTLCLEGTLLAGRDLRYISLSMGGCFTFGAFILLILSSRFGLQGCWLGFRWPSSAFFRPMACFLKILSSISNSRLHRLVYTSKRLMSSRSNGRVFASCFRGFGLKTGIDMILITDHSLFNPFSSFHCLTSWNRKPLFCFTPSSPSKSEMACKLLLQTRFLHNTLFKNPCTSSLLPQSSIASFSNHQHLHSSPSSNLFLKTSRTHRDWFVTTCANRNPEVIDDSRETSAANEDHMDENSREQEGEVEVVGEVEKTELTHQSIWGQIKEIVRFTGPATGLWICGPLTSLMDTAVIGQGSSIELAALGPATVVCDYMSYLFMFLSIATSNMVATALAKQDRDEVQHHISVLLLVALACGFVMVLFTKFFGASMLTAFTGSKNLHLVPAANTYVQIRGLSWPALFVGWVAQSASLGMKDSWGPLKALAVASAINGIGAVILCIYLGYGIAGAAWAAMASQVFAGYMMLQTLKEKGYNAYALSIPSAQEFFSIVGLATPVFLTLMSKVCFYSLLIYFATSMGTNTMAAHQVMAQTFYTCSVWGEPLSQTAQSFMPELIYGLKRSLAKARGLLRSLVIIGATLGLLLGTVGTSVPWLFPKIFTPDQMVIQEMHKVLIPYFIALAIMPATLSLEGTLLAGRDLRFISLSMSGCFTFGAFLLLILSRRFGLQGCWFALAAFQWARFSMALQRLLSPNGMLYSEDFEQYKQLKAA 1238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g0108 1238 MobiDBLite consensus disorder prediction 753 776 - -
Lele48g0108 1238 CDD MATE_DinF_like 798 1210 IPR044644 -
Lele48g0108 1238 Pfam MatE 816 964 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Lele48g0108 1238 Pfam MatE 194 346 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Lele48g0108 1238 PANTHER PROTEIN DETOXIFICATION 44, CHLOROPLASTIC-RELATED 737 1222 IPR044644 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g0108 Lele-ChrLele48 1473379 1482972 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele45g1308 45 22861991 22867411 Lele48g0108 48 1473379 1482972 hybridization
Lele46g1408 46 20887611 20896985 Lele48g0108 48 1473379 1482972 hybridization