Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g1408 ATGGCAAGCAAACTCCTCTTACCTCAAAGTCCCTTTCTTCAAAATCCTCTCCGAAAGAATCCTTGCACATCATCACCTCCTCAATCTTACACTACCTTGTCGACCAATCACCTACTTCTCTACACCTTAGGACCTTCCTCTCACGTTACTGCTTTCCCTTCAAATTTGTGCCTTAAAACTTCGAGGACGCATCGCAATTGGTTCGTGCCCTCTTGCGTTTATAGGACTCAAGAACTCATTGATGATGGCGGCGAAACTTCACTTGAGAATGAAGATCACGTGGAAGAGAATTCTCGAGAAGAAGAAGGCGAAGATGGAATGGTGGGGAAGATTGAGAAGCAGAAACTGGCTGACCAGACCATATGGGGTCAGATGAAGGAAATCATCAAGTTTACTGGACCAGCAACGGGGCTTTGGATATGCGGACCACTGATGAGTCTCATTGATACAGCTGTTATTGGTCAAGGAAGCTCGATTGAACTTGCTGCATTAGGCCCTGCTACAGTTGTTTGTGATTACATGAGTTACGCGTTCATGTTTCTCTCGATTGCTACTTCTAATATGGTCGCTACTGCTCTTGCTAAGCAGGATAGAGACGAAGTACAGCATCACATATCTGTCTTGCTTTTTGTTGGGCTAGCTTGTGGCTTCGTGATGCTTTTGTTTACACGATTATTCGGTGCAGCAACACTCACTGCTTTTACTGGGTCAAAGAATTTACATGTGGTACCTGCAGCAAACACTTATGTGCAGATTCGAGGCTTGGCATGGCCAGCATTACTAGTTGGCTGGGTTGCTCAAAGTGCTAGTCTTGGCATGAAAGATTCCTGGGGACCCTTGAAGGCTTTAGCTGCTGCTAGTGTTATAAATGGTGTTGGTGATATAGTTTTGTGCATCTTTTTAGGCTATGGCATTGCTGGGGCTGCTTGGGCTACAATGGCTTCACAAGTTGTTGCTGCATACATGATGATTCAGACTCTAAATGAGAATGGATACAATGCATTTGTCTTCTCTGTCCCTTCTGTCCAGGAGATTTGGACAATACTTGGGCTTGCTGCTCCTGTATTTTTGACAATGATGTCAAAGGTGGCTTTCTACTCATTGCTTATATATTTTGCTACATCAATGGGCACACATACAATGGCTGCTCATCAAGTCATGGTTCAAACCTTCTGCATGTGTGCAGTATGGGGTGAGCCTCTCTCTCAAACTGCACAATCATTTATGCCTGAATTGATATGTGGTGCCAATCGGAGCTTGGAAAAGGCTAGAATACTTCTGAAGTCTCTTGTCATAATTGGAGCTACTCTCGGATTTCTGCTAGGAATTGTTGGAACATCAGTTGCTTGGCTATTCCCCAACATTTTTACGCCTGATCAGATGGTCATCCAGGAGATGCACAAGGTGCTGATTCCATACTTCATAGCACTAGCTGTGACATCCCCTACCCACAGCCTTGAAGGAACATTGCTGGCTGGACGGGATCTAAGATTTATAAGTCTGTCAATGAGTGGATGCTTTACTTTAGGTGCACTTGTATTACTGATGTTGAGTGGCAGATTTGGCTTGCAAGGCTGTTGGTTTGCACTCGCAGGATTTCAATGGGCTCGGTTTTCAATGGCCCTCCAGCGCCTTCTTTCTCCCAGTGGCATGTTATACTCTGAAGAATTTGGTCATTGGAAGCCGTTTTTCTGCTTCGTTCCTTCATCACCATCAAAATCGGAGATGGCTAGTAAACTCCTACTTCAAACTCGTTTTCTCCACAACACTCTCTTCAAGAACCCTTGTACTTCATCATCACTTCCTCAATCTTCAACCTCCTTGATCTCCAATCATCAACACCTCCATTCATCCCCACCTTCATTTCACATTCCTACTTTCCATTCAAATCTATTCTTTAAAACTTCCAGGACGCATCGCGATTGGTTCGTCACCACTTGCGCTAATCGGAATCCTGAACTCATTGATGATAGCCGGGAAACTTCTGTCGCAAATGAGGATTATGTGGATGAGAATTCTCGAGAACAAGAAGGTGAAGTTGAAGTGGTGGGAGAGGTTCAGAAGACGGAACTCGCTGACCAGAGCATATGGGACCAGATGAAGCAAATTGTCATGTTTGCAGGACCAGCAACGGGACTTTGGGTATGCGGACCCCTAATGAGTCTCATTGATACGGCTGTTATTGGTCAGGGAAGTTCGATTGAGCTAGCTGCCTTAGGCCCTGCTACAGTTGTGTGTGATCACATGAGTTTCGTGTTCATGTTTCTCTCAATTGCGACTTCTAACATGGTTGCCACTGCGCTTGCTAAACAGGATAGAGACGAAGTACAGCATCACATCTCTAACTTGCTTTTAGTTGGGTTAGCTTGTGGCTTCGCGATGCTTTTGTTCACAAGATTCTTCGGTGCATCAATTCTTACTGCTTTTACTGGGCCAAAGAATTTACATGTGGTGCCTGCCGCAAACACTTATGTCAAGATTCGAGGCTTGTCATGGCCCGCATTACTTGTCGGATGGGTTGCTCAAAGCGCTAGTCTTGGTATGAAGGATTCCTGGGGACCCTTGAAGTCTTTGGCCGCTGCTAGTGCTATAAATGTCGTTGGTGCTGTAGTTTTGTGTATTTATCTGGGCTATGGTATTGCAGGGGCCGCATGGGCTACAATGGCAGCACAAGTTGTTGCGGGGTACATGATGCTTCAGACTCTAAAAGGGAAGGGATATAATGCATATGCCCTCTCCATTCCTTCAGCCCAAGAGTTTTTTTCAATAGTTGGGCTTGCTACCCCTGTATTTTTGACACTGATGTCAAAGGTTGGCTTCTACTCACTACTTATATATTTTGCCACATCAATGGGCACACATACAATGGCTGCTCATCAAGTCATGGTTCAAACCTTCTGCTCATGTACAGTATGGGGTGAACCTCTCTCTCAAACTGCCCAATCATTTATGCCCGAATTGATTTATGGCAGTAAACGGAGTTTGGCAAAGGCTAGAGGTCTTCTAAGGTCTCTAGTAATAATTGGAGCGACACTCGGATTGCTGTTAGGAATTGTTGGGACCTCAGTTCCTTGGTTGTTCCCCAAAATTTTTACCCCCGATCAGATGATCATCCAGGAGATGCACAAGGTGCTGATTCCATACTTCATAGCGCTTGCTATAACACCCCCTACTCTTTGCCTTGAAGGAACATTGCTGGCTGGACGCGATCTAAGATATATAAGTTTATCAATGGGTGGATGCTTCACCTTTGGTGCATTTATACTATTGATACTGAGCAGCAGATTTGGCTTGCAAGGTTGCTGGTTAGCACTCGCAGCATTTCAATGGGCTCGGTTTTCAATGGCCCTCCAGCGCCTTCTTTCGCCCAATGGCGTGTTATCTGAAGATTTTGAGCAGTATAAGCAACTCAAGGCTGCATAG 3423 0.4511 MASKLLLPQSPFLQNPLRKNPCTSSPPQSYTTLSTNHLLLYTLGPSSHVTAFPSNLCLKTSRTHRNWFVPSCVYRTQELIDDGGETSLENEDHVEENSREEEGEDGMVGKIEKQKLADQTIWGQMKEIIKFTGPATGLWICGPLMSLIDTAVIGQGSSIELAALGPATVVCDYMSYAFMFLSIATSNMVATALAKQDRDEVQHHISVLLFVGLACGFVMLLFTRLFGAATLTAFTGSKNLHVVPAANTYVQIRGLAWPALLVGWVAQSASLGMKDSWGPLKALAAASVINGVGDIVLCIFLGYGIAGAAWATMASQVVAAYMMIQTLNENGYNAFVFSVPSVQEIWTILGLAAPVFLTMMSKVAFYSLLIYFATSMGTHTMAAHQVMVQTFCMCAVWGEPLSQTAQSFMPELICGANRSLEKARILLKSLVIIGATLGFLLGIVGTSVAWLFPNIFTPDQMVIQEMHKVLIPYFIALAVTSPTHSLEGTLLAGRDLRFISLSMSGCFTLGALVLLMLSGRFGLQGCWFALAGFQWARFSMALQRLLSPSGMLYSEEFGHWKPFFCFVPSSPSKSEMASKLLLQTRFLHNTLFKNPCTSSSLPQSSTSLISNHQHLHSSPPSFHIPTFHSNLFFKTSRTHRDWFVTTCANRNPELIDDSRETSVANEDYVDENSREQEGEVEVVGEVQKTELADQSIWDQMKQIVMFAGPATGLWVCGPLMSLIDTAVIGQGSSIELAALGPATVVCDHMSFVFMFLSIATSNMVATALAKQDRDEVQHHISNLLLVGLACGFAMLLFTRFFGASILTAFTGPKNLHVVPAANTYVKIRGLSWPALLVGWVAQSASLGMKDSWGPLKSLAAASAINVVGAVVLCIYLGYGIAGAAWATMAAQVVAGYMMLQTLKGKGYNAYALSIPSAQEFFSIVGLATPVFLTLMSKVGFYSLLIYFATSMGTHTMAAHQVMVQTFCSCTVWGEPLSQTAQSFMPELIYGSKRSLAKARGLLRSLVIIGATLGLLLGIVGTSVPWLFPKIFTPDQMIIQEMHKVLIPYFIALAITPPTLCLEGTLLAGRDLRYISLSMGGCFTFGAFILLILSSRFGLQGCWLALAAFQWARFSMALQRLLSPNGVLSEDFEQYKQLKAA 1140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g1408 1140 MobiDBLite consensus disorder prediction 1 29 - -
Lele46g1408 1140 CDD MATE_DinF_like 699 1113 IPR044644 -
Lele46g1408 1140 PANTHER PROTEIN DETOXIFICATION 44, CHLOROPLASTIC-RELATED 82 551 IPR044644 -
Lele46g1408 1140 MobiDBLite consensus disorder prediction 8 29 - -
Lele46g1408 1140 CDD MATE_DinF_like 124 538 IPR044644 -
Lele46g1408 1140 Pfam MatE 718 870 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Lele46g1408 1140 Pfam MatE 142 293 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Lele46g1408 1140 TIGRFAM matE: MATE efflux family protein 136 527 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Lele46g1408 1140 MobiDBLite consensus disorder prediction 84 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g1408 Lele-ChrLele46 20887611 20896985 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele46g1408 46 20887611 20896985 Lele48g0108 48 1473379 1482972 hybridization