LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele48g0064	ATGGGCAATAGCGAGGAGCCCAAGAAACCCATTTCCCTCTATGACTCCGCCTCCTCCTCGCCTTCTCATTCACAGCCTCTGCTCTCCAAAACTTCTTTCCCTTCTCCGATCGATGAACCGCCTCGCAGCGAATCCGACCCGACCCAGTATCTCCAAATCTGTTACAATCATGGTCCTCGCTCCTTCAAGGACATTCCTTTCTTAATCCTCTTCCTTCTCTTCGTTCTCTGCACCTTCGGTTTCGGCATCTTCGCCATCTTTCATAGGAATTCCAACTATTCCACTGTCTCGTCTTACACTTACAATTATAATTCTTCCTCCTGCGTTACGGATTCCCTGTCATCTGCCAATTGGGATTTCCTAGATTCTTCGTCTTCGCATGTTCCGGAGGATTTGATATGGACCCTTGTGGCTACCTTGATCCTGAGCCTGCCCATATGCTTCGGTCTTCTTTTGTTACTGAAGCATTATACCAAACAGATTGTGTACGTTTCCCTTCCATTCTTCATCGTCGTCCCTATTTTCTTGAACGTGTATTGGTTCGTTGCTTGCACTCTCAGCTCCACTTGCAGCGACGCGTTCCCGCTGGCATATAGAATTCTAGTGCTCGTGTTCGTCTTCTTAATTATTGGGGTGATTGTGTGGATCTTCGTGATCAATTGGCATCGGATTGAGCTCACTGTAAGAATAATTGGGGTTGCTTCTGACGCGCTTTCGAAGAATTTGGGTTTGTTTGTGGCACTACCCTGTTTGACTTTCGGATTGGTTATATATTATGCTCCAATCTTCGTGTTTTTGGTATTTGCGAGATTTAATGGTGATATTGTGGCAAAAGAATCGAGTGGTAAATATACTTGCGTTTGGAAGCAAGATAGCTGGGTGCCAGCTTATTTTGCATTAGCAATTCTCACGATGTTGTGGTCCGCAACAGTTATGATAGAAACACAAGTTTATGTGATCAGTGGCACAATTGCACAATGGTATTTCTCCAAGGAGGATAAAGCTCCGAGAAAGAGTATAAGAAGTTCTCTAAGAAATGCATTTGGTCCTTCATGTGGCACCATATGTTTGTCAGGTTTGCTTATCTGTCTTGTCCGGATGGTGCGTGCTGCTGTTGATAGTGCAAGACATGAGGATGCATCTGGGATAGTGAACCTTGTGTTACGATGTTGTGTAAATGCCTTGCTGACTGCGGTGGATTTTCTTAATAAGTTTACCATCAACTTTGCTGCAATAACTGGTGAAGCATACTGCTCCTCTGCAAGGATGACATATGAACTGCTGAGGCGTAATCTTCTCTCAGCTGTTTTTGTGGAGACCATCTCATCGCGCCTCTTGTTGGGAATTGTCTTTGTCCTCTCAGCAATATACACTATTGTGGTCTGTGTAATCTTAAAAGCTGCGAGTGACCTCGGAGCGTATTCGTATCTTGTGGCTGCATTGGCTTGGTTGCTATTGATACTAGTTATGGGTTTCTTCATGCATGTACTAGACAACGTGATTGAAGCTGTTTATGTGTGCTACGCCGTAGACAGGGACAAAGGAGAGGTTTGTAAACAAGAGGTTCATGAGGTGTATGTTCACCTACCCATTAGCAGAAGTCAAAGACAATCTCTTCCTTCGAGAACTATTGGCGTGTAA	1641	0.4449	MGNSEEPKKPISLYDSASSSPSHSQPLLSKTSFPSPIDEPPRSESDPTQYLQICYNHGPRSFKDIPFLILFLLFVLCTFGFGIFAIFHRNSNYSTVSSYTYNYNSSSCVTDSLSSANWDFLDSSSSHVPEDLIWTLVATLILSLPICFGLLLLLKHYTKQIVYVSLPFFIVVPIFLNVYWFVACTLSSTCSDAFPLAYRILVLVFVFLIIGVIVWIFVINWHRIELTVRIIGVASDALSKNLGLFVALPCLTFGLVIYYAPIFVFLVFARFNGDIVAKESSGKYTCVWKQDSWVPAYFALAILTMLWSATVMIETQVYVISGTIAQWYFSKEDKAPRKSIRSSLRNAFGPSCGTICLSGLLICLVRMVRAAVDSARHEDASGIVNLVLRCCVNALLTAVDFLNKFTINFAAITGEAYCSSARMTYELLRRNLLSAVFVETISSRLLLGIVFVLSAIYTIVVCVILKAASDLGAYSYLVAALAWLLLILVMGFFMHVLDNVIEAVYVCYAVDRDKGEVCKQEVHEVYVHLPISRSQRQSLPSRTIGV	546

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele48g0064	546	Pfam	Plasma-membrane choline transporter	205	513	IPR007603	GO:0022857\|GO:0055085
	Lele48g0064	546	PANTHER	CHOLINE TRANSPORTER-LIKE (SLC FAMILY 44)	34	528	IPR007603	GO:0022857\|GO:0055085
	Lele48g0064	546	MobiDBLite	consensus disorder prediction	1	46	-	-
	Lele48g0064	546	MobiDBLite	consensus disorder prediction	13	38	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele48g0064	Lele-ChrLele48	1141902	1145299	Wgd

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lele45g1353	45	23164945	23168379	Lele48g0064	48	1141902	1145299	hybridization
	Lele46g1449	46	21247261	21248093	Lele48g0064	48	1141902	1145299	hybridization