Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g1353 ATGGGCAGTAGCGAGGAGTCCAACAAACCAATTTCCCTCTATGACTCCGCCTCCTCGCCTTCTCATTCTCAGCCTCTGCTCTCCAAACCTTCTTTCCCTTCTCCGATCGACGAACCGCCCCGCAGCGAATCCGAGCCGACCCAGTATCTCCAAATCTGTTACAATCATGGTCCTCGCTCCTTCAAGGACATACCTTTCTTAATCTTCTTTCTTCTCCTCATTCTCTGCACCTTCGGTTTCGGCATCTTCGCCATCTTTCATAGGAATTCCAACTATTCCACTGTCTCGTCTTACTCTTACAATTATAATTCTTCCTCCTGCGTTAAGGATTCCCTGTCATCTGCCAATTGGGATTTCTTAAATTCTTCGTCTTCGCATGTTTTGGAAGATTTGATATGGACCCTCGTCGCTACCTTGATCCTGAGCCTGCCCATATGCTTTGGTCTTCTTTTGTTACTGAAGCATTACACCAAACAGATTGTGTACGTTTCCCTCCCGTTCTTCATCGTCGTCCCCATTTTCTTGAATGTGTATTGGTTCGTTGCTTGCACTGTCAGCTCCACTTGCAGCGATGCGTTTCCTCTGGCATATAGAATTCTAGTGCTCGTGTTCGTCTTCTTAATTATTGGGGTGATTGTGTGGATCTTCGTGATCAATTGGCATCGGATTGAGCTCACTGTAAGAATAATTGGGGTTGCTTCCGACGCGCTTTCGAAGAATTTGGGTTTGTTTGTGGCACTACCCTGTTTGACTTTTGGGTTGGTTATATATTATGCTCCAATCGTCGTGTTTTTGGTATTTGCGAGATTTAATGGTGATATTGTAGCAAAAGAATCGAGTGGTAAATATACTTGCGTTTGGAAGCAAGATAGCTGGGTGCCCGCTTATTTTGCATTGGCAATTCTCACGATGTTGTGGTCCGCAACAATTATGGTAGAAACACAAGTTTATGTGACTAGTGGCACAATTGCACAGTGGTATTTCTCCAAGGAGGATGAAGCTCCAAGAAAGAGTATAAGAAGTTCTCTGAGGAATGCATTTGGTCCTTCATCTGGCACCATATGTTTGTCAGGTTTGCTTATCTGTGTTGTCCGGATGGTGCGTGCTGCTGTTGATAGTGCAAGACATGAGGATGCATCTGGGATAGTGAACCTTGTATTACGATGCTGTGTAAATGCCTTGTTGACTGCGGTAGATTTTCTTAATAAGTTTACCATCAACTTTGCTGCAATAACTGGTGAAGCATACTGCTCCTCTGCAAGGATGACATATGAACTTCTGAGGCGTAATCTTCTCTCAGCCGTTTTTGTGGAGACCATCTCATCCCGTCTCTTGGTTGGAATTTTCTTCGTCGTCTCAGCAATATACACTATTGTGGTATGTGCAATCATAAAAGCTGTGAGCGATCTCGGAGCCTATTCGTATCTTGTGGCTGCGCTGGCTTGGTTGCTATTGATATTAGTTTTGGGTTTCTTCGTGCATGTACTAGACAACGTGATTGAAGCTGTTTATGTGTGCTATGCCATAGACAGGGACAAAGGAGAGGTTTGTAAACAAGAAGTTCATGAGGTGTATGTTCACCTACCCATTAGCAGAAGTCAAAGACAATCTCTTCCATCAAGAACTATTGGCGTGTAA 1638 0.4408 MGSSEESNKPISLYDSASSPSHSQPLLSKPSFPSPIDEPPRSESEPTQYLQICYNHGPRSFKDIPFLIFFLLLILCTFGFGIFAIFHRNSNYSTVSSYSYNYNSSSCVKDSLSSANWDFLNSSSSHVLEDLIWTLVATLILSLPICFGLLLLLKHYTKQIVYVSLPFFIVVPIFLNVYWFVACTVSSTCSDAFPLAYRILVLVFVFLIIGVIVWIFVINWHRIELTVRIIGVASDALSKNLGLFVALPCLTFGLVIYYAPIVVFLVFARFNGDIVAKESSGKYTCVWKQDSWVPAYFALAILTMLWSATIMVETQVYVTSGTIAQWYFSKEDEAPRKSIRSSLRNAFGPSSGTICLSGLLICVVRMVRAAVDSARHEDASGIVNLVLRCCVNALLTAVDFLNKFTINFAAITGEAYCSSARMTYELLRRNLLSAVFVETISSRLLVGIFFVVSAIYTIVVCAIIKAVSDLGAYSYLVAALAWLLLILVLGFFVHVLDNVIEAVYVCYAIDRDKGEVCKQEVHEVYVHLPISRSQRQSLPSRTIGV 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g1353 545 Pfam Plasma-membrane choline transporter 204 512 IPR007603 GO:0022857|GO:0055085
Lele45g1353 545 MobiDBLite consensus disorder prediction 1 30 - -
Lele45g1353 545 MobiDBLite consensus disorder prediction 1 44 - -
Lele45g1353 545 PANTHER CHOLINE TRANSPORTER-LIKE (SLC FAMILY 44) 34 527 IPR007603 GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g1353 Lele-ChrLele45 23164945 23168379 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele45g1353 45 23164945 23168379 Lele47g0061 47 435018 438435 hybridization
Lele45g1353 45 23164945 23168379 Lele48g0064 48 1141902 1145299 hybridization