Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g0046 ATGGCCAAAAAGCCTGCACCAAGACCCAGCAAATTATCAGTGTACCTTTACGTTCCTAATATCATTGGCTACATCCGGGTTCTTGTGAACTGTGCTGCCTTCTACCTATGCTTCAGAAACAGAATGCTTTTCTGCGTTCTTTATTTTTTTAGCTTTGTCTGTGATGCTGTGGATGGTTGGTGCGCTCGCAAATTTAACCAAGTGTCAACCTTTGGAGCTGTTCTGGACATGATAACAGACAGAATTAGTACAGCTTGTCTACTTGTAATTCTTTCCCAAGTGTACAAGCCTGGTCTGATCTTCTTGTCACTGCTTGCCTTAGATATTGCAAGCCACTGGCTGCAGATGTACAGCACTTTCTTGCTGGGCAAGGATAGTCATAAAGATGTAAAAGACAGCACTAGCTGGCTTTTTAAGGCGTATTATGGGAATAGGATGTTTATGGCTTACTGTTGTGTCTCATGTGAGGTCCTTTACTTGATCCTATTTCTTCTGTCAGAGAATCAAACGGACAAATTGGTGGATGTGTTAGCGAGTAGTTTGCAAAAGATATCAATAGTTTCTTTCCTGGTTGGTACAAGTTTATTTGGATGGGCGATCAAGCAAGTTGTAAATATCATTCAGATGAAGACAGCAGCAGACGTGTGTGTGCTTCATGACATTGAGAAGAAGCAAAAGCGTTAA 684 0.4152 MAKKPAPRPSKLSVYLYVPNIIGYIRVLVNCAAFYLCFRNRMLFCVLYFFSFVCDAVDGWCARKFNQVSTFGAVLDMITDRISTACLLVILSQVYKPGLIFLSLLALDIASHWLQMYSTFLLGKDSHKDVKDSTSWLFKAYYGNRMFMAYCCVSCEVLYLILFLLSENQTDKLVDVLASSLQKISIVSFLVGTSLFGWAIKQVVNIIQMKTAADVCVLHDIEKKQKR 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g0046 227 PIRSF CDP_diag_ino_3_P 1 227 IPR014387 -
Lele48g0046 227 PANTHER PHOSPHATIDYLINOSITOL SYNTHASE 10 225 - -
Lele48g0046 227 ProSitePatterns CDP-alcohol phosphatidyltransferases signature. 58 80 IPR000462 GO:0008654|GO:0016020|GO:0016780
Lele48g0046 227 FunFam CDP-diacylglycerol--inositol 3-phosphatidyltransferase 11 210 - -
Lele48g0046 227 Pfam CDP-alcohol phosphatidyltransferase 17 140 IPR000462 GO:0008654|GO:0016020|GO:0016780
Lele48g0046 227 Gene3D - 8 168 IPR043130 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g0046 Lele-ChrLele48 1037214 1040535 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele48g0046 1 226 Lipid Metabolism Gene Families AT1G68000 74.336 8.81e-132 369
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele45g1368 45 23278822 23282438 Lele48g0046 48 1037214 1040535 hybridization
Lele46g1464 46 21353433 21357416 Lele48g0046 48 1037214 1040535 hybridization