Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g1368 ATGAATCCGGTCAGTGAGAGCGAAGCGTTTCTAGCTTTTTATGAGCTTCATGACTCGAATGTGATTCCTGATTTGACATTTACCGACAATAACGGCCATATAAAGAAGCATTCAATGGCCAAAAAACCTGCACCAGGACCCAGCAAATTATCAGTGTACCTTTACGTTCCTAATATTATTGGATACATCCGGGTTCTTGTGAACTGTGCTGCCTTCTACCTATGCTTCAGAAACAGAATGCTTTTCTGTATTCTTTATTTTTTTAGCTTTGTCTGTGATGCTGTGGATGGTTGGTGCGCTCGCAAATTTAACCAGGTGTCAACCTTTGGAGCTGTTCTGGACATGATAACAGACAGAATTAGTACAGCTTGTCTACTTGTAATTCTTTCCCAAGTATACAAGCCTGGTCTGATCTTCTTGTCACTGCTTGCCTTAGATATTGCAAGCCACTGGCTGCAAATGTACAGCACTTTCTTGCTGGGCAAGGATAGTCATAAAGATGTAAAAGACAGCACTAGCTGGCTTTTTAAGGCATATTATGGGAATAGGATGTTTATGGCTTACTGTTGTGTCTCATGTGAGGTCCTTTACTTAATCCTATTTCTTCTGTCAGAGAATCAAACAGACAAATTGGTTGATGTGTTAGTGAGTAGTTTGCAAAAGACATCACTAGTTTCTTTCCTGGTCGGTACAAGTTTATTTGGATGGGCGATCAAGCAAGTTGTAAATATCATTCAGATGAAGACAGCGGCAGACGTGTGTGTGCTTCATGACATTGAGAAAAAGCAAAAGAGCTAA 798 0.4048 MNPVSESEAFLAFYELHDSNVIPDLTFTDNNGHIKKHSMAKKPAPGPSKLSVYLYVPNIIGYIRVLVNCAAFYLCFRNRMLFCILYFFSFVCDAVDGWCARKFNQVSTFGAVLDMITDRISTACLLVILSQVYKPGLIFLSLLALDIASHWLQMYSTFLLGKDSHKDVKDSTSWLFKAYYGNRMFMAYCCVSCEVLYLILFLLSENQTDKLVDVLVSSLQKTSLVSFLVGTSLFGWAIKQVVNIIQMKTAADVCVLHDIEKKQKS 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g1368 265 ProSitePatterns CDP-alcohol phosphatidyltransferases signature. 96 118 IPR000462 GO:0008654|GO:0016020|GO:0016780
Lele45g1368 265 PANTHER PHOSPHATIDYLINOSITOL SYNTHASE 48 263 - -
Lele45g1368 265 PIRSF CDP_diag_ino_3_P 36 265 IPR014387 -
Lele45g1368 265 Pfam CDP-alcohol phosphatidyltransferase 55 174 IPR000462 GO:0008654|GO:0016020|GO:0016780
Lele45g1368 265 Gene3D - 48 208 IPR043130 -
Lele45g1368 265 FunFam CDP-diacylglycerol--inositol 3-phosphatidyltransferase 49 248 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g1368 Lele-ChrLele45 23278822 23282438 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele45g1368 39 264 Lipid Metabolism Gene Families AT1G68000 73.451 4.62e-130 366
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele45g1368 45 23278822 23282438 Lele47g0044 47 327902 331507 hybridization
Lele45g1368 45 23278822 23282438 Lele48g0046 48 1037214 1040535 hybridization