Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele47g0078 ATGAGTCCTCAGAAAAAGCCGATCCACGCCGTGACAACATGGGTGAGGCGGCAACCCCCAAAGGTGAAGGCTTTTCTGGCCGTTGTTTCGGGTATGGCGGCTCTTGTGTTGCTTCGGTTCATTGTTCACGATCATGATAATCTATTTGTCGCTGCCGAGGCCGTGCACTCCTTGGGAATTTCTGTCCTCATCTATAAGCTTATGAAGGAGAAGACATGCGCTGGACTATCACTCAAATCTCAGGAATTAACAGCTTTATTTTTAGCTGTTCGGTTGTACTGCAGTTTTGTTATGGAATATGATATACACACCCTTCTTGATTTAGCTACTCTAGCTACCACTTTGTGGGTTATATATATGATTCGTTTCAAACTGAAGGCCAGTTATATGGAGGAGAAGGACAACTTTGCAATATACTATGTGGTGATACCATGTGCTGTGCTAGCGTTGTTGATTCATCCATCAACTTCTCATCATTTCGTGAACAGGATTTTCTGGGCCTTCTGTGTATATCTAGAAGCTGTTTCAGTACTACCCCAGTTGCGGGTCATGCAGAACACCAAAATTGTTGAGCCATTCACAGCTCATTATGTATTTGCACTGGGTGTTGCAAGATTCCTGAGCTGTGCTCATTGGGTTCTTCAGGTCTTGGATAGTCGCGGACAGTTGTTGGTTGCCCTGGGCTATGGATTATGGCCATCTATGGTTCTTATTTCTGAAATTGTTCAGACTTTCATCTTAGCAGATTTCTGTTACTACTATGTCAAAAGTGTTTTTGGGGGTCAGCTTGTTCTTCGTCTTCCCTCTGGAGTGGTGTGA 819 0.4408 MSPQKKPIHAVTTWVRRQPPKVKAFLAVVSGMAALVLLRFIVHDHDNLFVAAEAVHSLGISVLIYKLMKEKTCAGLSLKSQELTALFLAVRLYCSFVMEYDIHTLLDLATLATTLWVIYMIRFKLKASYMEEKDNFAIYYVVIPCAVLALLIHPSTSHHFVNRIFWAFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFALGVARFLSCAHWVLQVLDSRGQLLVALGYGLWPSMVLISEIVQTFILADFCYYYVKSVFGGQLVLRLPSGVV 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele47g0078 272 PRINTS ER lumen protein retaining receptor signature 166 186 IPR000133 GO:0006621|GO:0016020|GO:0046923
Lele47g0078 272 PRINTS ER lumen protein retaining receptor signature 188 202 IPR000133 GO:0006621|GO:0016020|GO:0046923
Lele47g0078 272 PRINTS ER lumen protein retaining receptor signature 202 220 IPR000133 GO:0006621|GO:0016020|GO:0046923
Lele47g0078 272 PRINTS ER lumen protein retaining receptor signature 48 67 IPR000133 GO:0006621|GO:0016020|GO:0046923
Lele47g0078 272 PRINTS ER lumen protein retaining receptor signature 75 95 IPR000133 GO:0006621|GO:0016020|GO:0046923
Lele47g0078 272 PANTHER ER LUMEN PROTEIN RETAINING RECEPTOR 47 270 IPR000133 GO:0006621|GO:0016020|GO:0046923
Lele47g0078 272 Pfam ER lumen protein retaining receptor 72 214 IPR000133 GO:0006621|GO:0016020|GO:0046923
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele47g0078 Lele-ChrLele47 537720 540315 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele47g0078 5 272 Miscellaneous Gene Families AT2G21190 88.806 0.0 498
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele45g1333 45 23059122 23061648 Lele47g0078 47 537720 540315 hybridization
Lele46g1430 46 21113182 21115845 Lele47g0078 47 537720 540315 hybridization