Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g1430 ATGGCGGCCCTTGTGTTGCTTCGGTTCATTGTTCACGATCATGATAATCTATTTGTTGCTGCCGAGGCCGTGCACTCCTTGGGAATTTCCGTCCTCATCTATAAGCTTATGAAGGAGAAGACATGCGCTGGATTATCACTTAAATCTCAGGAATTAACAGCTATATTTTTAGCTGTTCGGTTGTACTGCAGTTTTGTTATGGAATATGATATACACACCCTTCTTGATTTAGCTACTTTAGCTACCACATTGTGGGTTATATATATGATTCGTTTCAAACTGAAGGCTAGTTACATGGAGGAGAAGGACAACTTTGCAATATACTATGTGTCTGGTTCATATCCTCCGTCTTTAAAATTGAATGCAGGTGATACCATGTGGTGTGCTAGCGTTGTTGATTCATCCATCAACTTCTCATCATTTCGTGAACAGGATTTTCTGGGCGTTCTGTGTATATCTAGAAGCTGTTTCAGTACTACCCCAATTGCGGGTCATGCAGAACACCAAACTCATTATGTATTTGCACTGGGTGTTGCAAGATTCCTGAGCTGTGCTCATTGGGTTCTTCAGGTCTTGGACAGTCGTGGACAGTTGTTGGTTGCACTGGGCTATGGATTATGGCCATCAATGGTTCTTATCTCTGAAATTGTTCAGACTTTCATCTTGGCAGATTTCTGTTACTACTATGTCAAAAGGTTGGTTTTAACTTGTTCTTCGTCTTCCCTCTGGAGTGGTGTGATTGAGAATCTGCTCGAGTGCACGCTCCCACTGGACCTAATCAGGCGTTATGGTTGGTCATCATCTTTGGGATCCTTTTTGTGTGGATACTCCATTTTGGTCCCTGGGAAGGAGCTGGTTGTTTGCAGAATTGGGCATGTTAAGATGTACTGA 891 0.4265 MAALVLLRFIVHDHDNLFVAAEAVHSLGISVLIYKLMKEKTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHTLLDLATLATTLWVIYMIRFKLKASYMEEKDNFAIYYVSGSYPPSLKLNAGDTMWCASVVDSSINFSSFREQDFLGVLCISRSCFSTTPIAGHAEHQTHYVFALGVARFLSCAHWVLQVLDSRGQLLVALGYGLWPSMVLISEIVQTFILADFCYYYVKRLVLTCSSSSLWSGVIENLLECTLPLDLIRRYGWSSSLGSFLCGYSILVPGKELVVCRIGHVKMY 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g1430 296 Pfam ER lumen protein retaining receptor 41 189 IPR000133 GO:0006621|GO:0016020|GO:0046923
Lele46g1430 296 PRINTS ER lumen protein retaining receptor signature 17 36 IPR000133 GO:0006621|GO:0016020|GO:0046923
Lele46g1430 296 PRINTS ER lumen protein retaining receptor signature 177 195 IPR000133 GO:0006621|GO:0016020|GO:0046923
Lele46g1430 296 PRINTS ER lumen protein retaining receptor signature 163 177 IPR000133 GO:0006621|GO:0016020|GO:0046923
Lele46g1430 296 PRINTS ER lumen protein retaining receptor signature 44 64 IPR000133 GO:0006621|GO:0016020|GO:0046923
Lele46g1430 296 PANTHER ER LUMEN PROTEIN RETAINING RECEPTOR 17 232 IPR000133 GO:0006621|GO:0016020|GO:0046923
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g1430 Lele-ChrLele46 21113182 21115845 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele46g1430 1 231 Miscellaneous Gene Families AT4G38790 71.429 2.55e-107 311
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele46g1430 46 21113182 21115845 Lele47g0078 47 537720 540315 hybridization
Lele46g1430 46 21113182 21115845 Lele48g0083 48 1265532 1268125 hybridization