Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele47g0073 ATGGCGGATACTAATTCTGTCGACGCTTCTCTCTGGTGGGATTCTTTCACTCTGCTGCTTACTGAGCTTGAGAACTCCTCTCTCTCTCCTCAGACCTCCCTCCAAATTTGGTATCATTTCTACCACCTCCGCCTCCGCCTCCGCCTCCCCCTCCCCCCCTCTCTCTCAACCTGTACGTTTTCACGCTTCAAGTCGCCAAATGAGAAATCAAAGGAAGCTCTGAATTCAAAGAAAATGCAAATTGGATCTCACCAACTTACTATACAAACGCATTGGAAAGACCAAGCTTTGAAAATCAGCTCCTGCTTGCAATTAGATGAAGTTCAATCATACATTCTTGCCGAAAGGTCAATGAAACATAATGTAGCAGTTGATTCCATGGATCAAGAATTTCTTTATGTGGTGGATTCTCATGCATGCTATTCGCATTTGGGTGGGACAATAGATGAGAAGTCTGGTGAGGGCTTTTCTAAAATTTCAAATGCAATCCTTGGCCTACTTCCCATTCTTAGCAAATGTGTTGCTGATCCTGAACATTGTGTGCTGTCTCTGTCTGCTATGGACCTGATATTAAGAAATTTCTCGACGCGCGAGACTTGGTTACCTGTCATACAGAATCATCTCCAGCTTCCACTTCTTATGCTAAAACTTCAAGATAAAGTGTCCTCTTCCATTCCAATGATGTTGAAGTTTCTTTTGACCCTTGCACGTGTAAAAGGAGGTGCTGAGATGCTTTATGGTTCTGGTTTCTTGTCGTCTCTGAGAGTGTTGTATGCTGAAAGTGACGAGGCGTTCTCAAGAATTCATAGCGAAAATGTGGGTAGCTTACATGAAAAGTTTGAAATGCTCGGAGACATTTGGGGACTTGGATTAACTGTGGTCACAGCTATGGTTCAATCCTTGGAAGACAGTCCTTCTTGCACAGCTATTGTGGACAGTGTAATACCTTACTTTTTCCAGGAGAATGCTTATCTTATTTTTGGTTCTCTAAATGCTCCGGACCTCCCTTCAGATCAGCGTGACAAGAGAAGACCTCGACCACAGAGGTCATGGATGTCTCTTGCTAATCTTAAGGAGACAGAACATACTTTGATGCTCATGTGTGAACTAGCAAAACATTGGAATTCATGGACTAAGGAGGTTGGTTTTGTTGATCTTGCACATTTTCCCGAGCTTCCCATGCCAGAAATCTTGCATGGATTGCAGGATCAAGCCATTGCGATTGTTACAGAGTTATGTGAGGCCAACAAACCGAGGGTTTCTCCTCAAATTCAGAATCTTTGTTACTTATTTCTGCAAATAATTGAAATGGCCTTGCAGTTGGAGCTTTGTGTACTGCAGATCTGCGGCATAAGACCAGTATTAGGGCGTGTGGATGATTTTTCAAAGGACATTAAAACTTTATTTGGTGCCATGGAGGAGCATGCGTTTCTGAATGCTTCTAAGAAGTCCTTAAAACAAATGATATCATTTGTCTATCCTGGAATGCTGCAATCCGAGGGTTTATGA 1509 0.4274 MADTNSVDASLWWDSFTLLLTELENSSLSPQTSLQIWYHFYHLRLRLRLPLPPSLSTCTFSRFKSPNEKSKEALNSKKMQIGSHQLTIQTHWKDQALKISSCLQLDEVQSYILAERSMKHNVAVDSMDQEFLYVVDSHACYSHLGGTIDEKSGEGFSKISNAILGLLPILSKCVADPEHCVLSLSAMDLILRNFSTRETWLPVIQNHLQLPLLMLKLQDKVSSSIPMMLKFLLTLARVKGGAEMLYGSGFLSSLRVLYAESDEAFSRIHSENVGSLHEKFEMLGDIWGLGLTVVTAMVQSLEDSPSCTAIVDSVIPYFFQENAYLIFGSLNAPDLPSDQRDKRRPRPQRSWMSLANLKETEHTLMLMCELAKHWNSWTKEVGFVDLAHFPELPMPEILHGLQDQAIAIVTELCEANKPRVSPQIQNLCYLFLQIIEMALQLELCVLQICGIRPVLGRVDDFSKDIKTLFGAMEEHAFLNASKKSLKQMISFVYPGMLQSEGL 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele47g0073 502 PANTHER NUCLEOPORIN NUP188 HOMOLOG 383 499 IPR044840 GO:0017056
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele47g0073 Lele-ChrLele47 497234 501682 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele45g1343 45 23092728 23098448 Lele47g0073 47 497234 501682 hybridization
Lele46g1436 46 21155814 21176717 Lele47g0073 47 497234 501682 hybridization