Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g0132 ATGGCTACAGAGGAAGAGAGCGCGGTAAAGGAGCCGTTGGATCTCATCAGGCTCAGCCTGGACGAGCGTATCTACGTCAAGCTTCGTTCTGACAGAGAGCTTCGCGGCAAGCTTCACGCTTATGATCAGCATCTGAATATGATTCTTGGTGATGTGGAAGAAGTTGTTACTACTGTTGAAATTGACGATGAGACATATGAAGAGATTGTCAGGAAAGCTGTTGATAAAGGCCTGGCTCATGCGGGTTCAGTGTACGTGCCTTATGCCACAACTACCAAGAGGATAGTTCCTTTCCTGTTTGTAAGGGGAGATGGGGTGATATTGGTTTCCCCACCGCTGAGGACCGCATGA 351 0.4872 MATEEESAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEVVTTVEIDDETYEEIVRKAVDKGLAHAGSVYVPYATTTKRIVPFLFVRGDGVILVSPPLRTA 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g0132 116 SMART Sm3 14 111 IPR001163 -
Lele46g0132 116 SUPERFAMILY Sm-like ribonucleoproteins 11 112 IPR010920 -
Lele46g0132 116 CDD LSm3 11 111 IPR034105 GO:0000398|GO:0003723
Lele46g0132 116 PANTHER U6 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM3 1 115 IPR040002 GO:0003723
Lele46g0132 116 Gene3D - 1 113 - -
Lele46g0132 116 Pfam LSM domain 16 111 IPR001163 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g0132 Lele-ChrLele46 749746 751860 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele46g0132 46 749746 751860 Lele46g0132 46 749746 751860 ECH
Lele46g0132 46 749746 751860 Lele47g1194 47 17415717 17417870 hybridization
Lele46g0132 46 749746 751860 Lele48g1325 48 17455819 17457982 hybridization