Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g0369 ATGAGTATGGAGAAGCTTATGCATGCGGTTCGGTACAATGGATATGGCGGAGGCCCTTCTGCCTTGAAGCATGACCAAGTTCCAATACCCACTCCAAACAAAGATGAGGTTTTGATCAAAGTGGAAGCATCTAGTATAAATCCATTTGATTGGAAAGTTCAAAAAGGCATGTTGTGGCCACTTTTACCTCCGAAGCTTCCTTACATACCCGGAGTTGATGTAGCTGGAGAGGTTGTTGAGGTTGGTTCTGGGGTTAAAAAATTCAAGCCTGGAGACAAAGTTGTATCTGTTGTTAATGTCTTGACTGGAGGAGCGCTAGCCGAATTTGCTGTTATTAATGAGAGCGTTACTGCATCAAGGCCACCTGAAATCTTGGCATCAGAATGTGCCGGCTTGCCTGTTGCCGGTCTCACAGCTCACCAGGCGCTCCAATCCGCTGGGATTAGACTCGATAATAATGGAAGCACTGAACGGAAAAACATATTGGTCACTGCGGCATCAGGTGGTGTAGGTCACTATGCAGTTCAACTGGCAAAGCTGGGAAACACACATGTAACAGCCACATGTGGAGCTCGAAACCTCGAACTAGTCAAAAGCTTAGGAGCCGACGAAGTCATCGACTATAAGACCCCGGAAGGTGCCGCCTTGAAGAGTCCATCAGGTAAGAAATATGATGCAGTGATTCACTGTGCAGTGGGGATTCCTTGGTCCACTTTTGAACCTAACCTGAGCAATAATGGAAAAGTCATAGATATAACTCCCTGTGCTAGTACATTGATGACATTTGCTCTCAAGAAACTTACCTTCTCCAGAAAGCAACTTGTGCCACTTCTTTTGATTCCAAAAGGAGAGAATCTTCAGTATGTGGTGGATTTGGTGAAGAATGGGAAGCTTAAGACGGTAATAGATTCTAAGTATCCTCTGAAGAAGATTGAAGATGCCTGGGCTAGGAGTGTTGAAGGTCATGCTACTGGGAAGATCATTGTGGAGCAGTAG 996 0.4538 MSMEKLMHAVRYNGYGGGPSALKHDQVPIPTPNKDEVLIKVEASSINPFDWKVQKGMLWPLLPPKLPYIPGVDVAGEVVEVGSGVKKFKPGDKVVSVVNVLTGGALAEFAVINESVTASRPPEILASECAGLPVAGLTAHQALQSAGIRLDNNGSTERKNILVTAASGGVGHYAVQLAKLGNTHVTATCGARNLELVKSLGADEVIDYKTPEGAALKSPSGKKYDAVIHCAVGIPWSTFEPNLSNNGKVIDITPCASTLMTFALKKLTFSRKQLVPLLLIPKGENLQYVVDLVKNGKLKTVIDSKYPLKKIEDAWARSVEGHATGKIIVEQ 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g0369 331 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 128 327 IPR036291 -
Lele41g0369 331 SMART PKS_ER_names_mod 17 329 IPR020843 GO:0016491
Lele41g0369 331 Gene3D - 14 329 - -
Lele41g0369 331 PANTHER ZINC-TYPE ALCOHOL DEHYDROGENASE-LIKE PROTEIN C16A3.02C 3 330 - -
Lele41g0369 331 Pfam Zinc-binding dehydrogenase 200 329 - -
Lele41g0369 331 CDD MDR1 10 329 - -
Lele41g0369 331 SUPERFAMILY GroES-like 5 151 IPR011032 -
Lele41g0369 331 Pfam Alcohol dehydrogenase GroES-like domain 35 99 IPR013154 -
Lele41g0369 331 Gene3D - 143 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g0369 Lele-ChrLele41 2985745 2990339 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele41g0369 41 2985745 2990339 Lele37g1092 37 20616468 20620964 CCT
Lele41g0369 41 2985745 2990339 Lele39g0322 39 2270310 2274588 CCT
Lele41g0369 41 2985745 2990339 Lele43g1006 43 18606322 18607221 hybridization