Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g1092 ATGGCGTTCAAGCACCTGATAACCTTGGCTCGGCGTTCACACCGACGTCGTAACTCTGCTCTCTCACCCGCCTACCAGACCGTCCGATCTTCATCATCTTATCCGTCCATCGCTACCGAATCGTCCGTTCCTTCCCCTCCTCCTCCCAATGCCATGATCTACGATCGCCTCGCTGAGGCTGTGAAATCCAAACTTAAGCAGCTCGAGAACCCCGACCCACGATTCCTCAAATATGGTTCTCCTCGCCCCACCTTGTCGGATCATACTCGGATCCTTTCTGCACCCGAAACTCGTGTTACCACTCTTCCTAATGGACTTCGGGTGGCCACGGAGTCTAACCTTGCCGCGAAAACAGCTACAGTCGGCGTCTGGATTGACGCAGGATCACGGTTTGAGACCGAGGAGACTAATGGGACGGCCCATTTCCTCGAGCACATGATCTTTAAGGGTACTGAGAAGAGGACGGCGCGCCAGCTTGAGGAGGAGATTGAGAATATGGGTGGGCATTTGAATGCGTACACATCGAGGGAACAGACTACTTATTATGCCAAGGTTACGGATAAGGATGTTCCTACGGCACTTGATATTTTGTCTGATATATTGCAGAATTCAATGTTTGAGGAGAAAAGAATTAGCCGAGAGCGCGATGTGATACTCAGGGAAATGGAAGAGGTTGAGGGGCAAACGGAGGAAGTCATTTTTGACCATTTGCATGCAACAGCTTTCCAGTACACTCCTCTGGGTAGAACTATTCTAGGACCTGCTCAGAACATTAAGACAATCACCAAAGATCATCTACAGAGCTACATTCAGACACACTACACAGCTCCCAGGATGGTTATAGCTGCATCTGGAGCTGTCAAGCATGAAGATATTGTTGAGCAAGTAAAAAAAATATTCACAAAGTTGTCAGCTGATCCCACTACTGCTTCTCAATTAGTTTCAAAAGAACCAGCTATTTTTACCGGTTCTGAGGTTAGAATGATCGATGATGATATTCCCCTCGCACAATTCACAGTGGCTTTCGAAGGAGCAGCGTGGACAGATCCCGATTCCATTTCCCTGATGGTCATGCAGGCTATGTTGGGCTCTTGGAACAAGACAGCAGGAGTTGGAAAACATATGGGTTCTGAGTTGGCACAACGGGTTGGCATTAATGAAGTTGCAGAAAGCATGATGGCTTTCAACACCAACTATAAGGATACTGGTCTGTTTGGTGTTTATGCTGTTGCTAAGTTGGCTTATCGTGTTTCAGAAGATGACGTCACACGTGCTCGTAATCAGCTTAAATCTTCACTCCTACTACACATAGATGGTACAAGTCCAGTGGCTGAAGATATTGGACGCCAGCTACTCACGTATGGTCGAAGAATTCCATTTGCCGAGTTGTTTGCCAGAATTGATGCTGTAGATGCGAGCACAATTAAACGGGCGGCAAACCGATTCATTTATGATAAGGATATAGCTATTGCAGCCATGGGACCTATTCAGGGCTTGCCTGATTACAACTGCATCATGGTGGTGACTGTTGTGGTGGTTGCTGTTGTGACCATGATTGCCATCATTATTGTCACTGCAGTCATCACCGCCACTGTCCCTATGGTGGTATTTGACATCTCTGGTGGTCTTTGCAATAAAAGTCTGGTATAG 1650 0.4721 MAFKHLITLARRSHRRRNSALSPAYQTVRSSSSYPSIATESSVPSPPPPNAMIYDRLAEAVKSKLKQLENPDPRFLKYGSPRPTLSDHTRILSAPETRVTTLPNGLRVATESNLAAKTATVGVWIDAGSRFETEETNGTAHFLEHMIFKGTEKRTARQLEEEIENMGGHLNAYTSREQTTYYAKVTDKDVPTALDILSDILQNSMFEEKRISRERDVILREMEEVEGQTEEVIFDHLHATAFQYTPLGRTILGPAQNIKTITKDHLQSYIQTHYTAPRMVIAASGAVKHEDIVEQVKKIFTKLSADPTTASQLVSKEPAIFTGSEVRMIDDDIPLAQFTVAFEGAAWTDPDSISLMVMQAMLGSWNKTAGVGKHMGSELAQRVGINEVAESMMAFNTNYKDTGLFGVYAVAKLAYRVSEDDVTRARNQLKSSLLLHIDGTSPVAEDIGRQLLTYGRRIPFAELFARIDAVDASTIKRAANRFIYDKDIAIAAMGPIQGLPDYNCIMVVTVVVVAVVTMIAIIIVTAVITATVPMVVFDISGGLCNKSLV 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g1092 549 ProSitePatterns Insulinase family, zinc-binding region signature. 128 151 IPR001431 GO:0004222|GO:0006508
Lele37g1092 549 Pfam Peptidase M16 inactive domain 261 411 IPR007863 -
Lele37g1092 549 FunFam Mitochondrial-processing peptidase subunit beta, mitochondrial 317 513 - -
Lele37g1092 549 SUPERFAMILY LuxS/MPP-like metallohydrolase 325 505 IPR011249 GO:0046872
Lele37g1092 549 Coils Coil 156 176 - -
Lele37g1092 549 PANTHER METALLOPROTEASE 93 500 - -
Lele37g1092 549 Gene3D - 84 306 - -
Lele37g1092 549 FunFam Mitochondrial-processing peptidase subunit beta 84 305 - -
Lele37g1092 549 Pfam Insulinase (Peptidase family M16) 107 254 IPR011765 -
Lele37g1092 549 SUPERFAMILY LuxS/MPP-like metallohydrolase 93 300 IPR011249 GO:0046872
Lele37g1092 549 Gene3D - 412 510 - -
Lele37g1092 549 Gene3D - 313 411 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g1092 Lele-ChrLele37 20616468 20620964 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele41g0369 41 2985745 2990339 Lele37g1092 37 20616468 20620964 CCT
Lele37g1092 37 20616468 20620964 Lele39g0322 39 2270310 2274588 hybridization