Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g1005 ATGGACAAGAGCGTATTTGGAGACTTAAATTCTCTTTCTGGAGAAGAGAAGGAAAAAATGTCTTCCGTGATCGATCAACTTCAAACCCGAGACAGTCTAAGGATGTATAATTCACTAGTAGAGAGATGTTTTGTGGACTGCGTGGATACATTTTATCGACGATCCCTGACCAAGAAAGAAGAAACATGTGTTCGTAGGTGTGCTGAAAAGTTCTTGAGGCATTCAGTTCTTTTAGGTTTGAGCTTTGCGGAACTCAATCAAGGGGCAACTTCAACAGATTAA 282 0.4043 MDKSVFGDLNSLSGEEKEKMSSVIDQLQTRDSLRMYNSLVERCFVDCVDTFYRRSLTKKEETCVRRCAEKFLRHSVLLGLSFAELNQGATSTD 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g1005 93 PANTHER MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM9B 15 89 - -
Lele40g1005 93 Pfam Tim10/DDP family zinc finger 24 83 IPR004217 -
Lele40g1005 93 Gene3D Mitochondrial import inner membrane translocase subunit tim13 like domains 7 92 IPR035427 -
Lele40g1005 93 SUPERFAMILY Tim10-like 28 88 IPR035427 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g1005 Lele-ChrLele40 20450584 20451998 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele40g1005 40 20450584 20451998 Lele41g0167 41 1313756 1332820 CCT
Lele38g1068 38 21995537 22000585 Lele40g1005 40 20450584 20451998 hybridization