Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g1068 ATGGATGATGGGATACGGGGATGGTCTACCAGAGAGGACAGCGACGATGAAGTCTCTTTGCAAAATACTAGCGACGAAGAAGAACATCACTTTTCGGCTAGTTCCATGCCCAAGTTGCAGTTTCGGTACATGATTTTGGGTGACTCAGCTAGCTGGAAAGATGAAATGGGAATGGCAGAAGTTATTGAAAAGAAAGGCAAATTGTGGGTAACAACTGGAGTCATTCGTGAAGGCAGGATATATTGTTCAATTGAGGAGACTCTGTATTTGATGGAATTAGGAGCGTTACATCTCTTGGATAATTGTGATATATGCATGCCTCTAACAGACATATACAGGAAGGCCGCAGGCAGGGAGGATGGATGCTGTTGGGAGCTGTTTGAGGTTTACAAGCACCTTAAGTCTCTTGGTTATATAATTGGACGGCATGGTGTTTCTTGGAGTATGAAGGATACTTCAAAAACTGTCCATGAACCTGTTGCTCTTGAAGTCACTGAAGAAAACAATCAATCAGTAGACGTGGGTTCCAGAGATGAGAAATCCTTAAATGAGTTGTTCAGTGAGATGCATATTAATGAATTGAGGCCAGATTTTGATGTTTATCTTCCAAATAACAAGTTTCGAAAGACTTCTCCTGGTGATCCGAGTTTTCTGCTCTACTTGTCCAGGGGCCATCCACCATCAAGAGCAGAAATTGAAGTCCTTGAGAAACAACGCGGTAAGATTCCTCTAAAAATTTCTCTGGTTGAGGATGGGCGGGTCAGTTTCTTTTCGTTTGACAAGGGTTTAAGCAGGGGCCATTTCTTTCTTTCCCGTTTCGGACAGCAGAGCCGTTATTCTGCTATAGCATTAAACTCCAGAAACCTTGACCGTAGGAATATTTCGTTTTCTTTCTTTTTCAAATCGATGATGGACAAGAGCGTATTTGGAGACTTGGATTCTCTTTCTGGTGAAGATAAGGAAAAAATGTCTGCCGTGATCGGTCAGCTTCAAACCCGAGACAGTCTAAGGATGTATAATTCACTAGTAGAGAGATGTTTTGTGGACTGCGTGGATACATTTTATCGACGATCCCTGACCAAGAAAGAAGAAACATGTGTTCGTAGGTGTGCTGAAAAGTTCTTGAGGCATTCAGTTCTTTTAGGTTTGAGCTTTGCAGAACTCAATCAAGGGGCAACTTCAACAGATTAA 1191 0.4215 MDDGIRGWSTREDSDDEVSLQNTSDEEEHHFSASSMPKLQFRYMILGDSASWKDEMGMAEVIEKKGKLWVTTGVIREGRIYCSIEETLYLMELGALHLLDNCDICMPLTDIYRKAAGREDGCCWELFEVYKHLKSLGYIIGRHGVSWSMKDTSKTVHEPVALEVTEENNQSVDVGSRDEKSLNELFSEMHINELRPDFDVYLPNNKFRKTSPGDPSFLLYLSRGHPPSRAEIEVLEKQRGKIPLKISLVEDGRVSFFSFDKGLSRGHFFLSRFGQQSRYSAIALNSRNLDRRNISFSFFFKSMMDKSVFGDLDSLSGEDKEKMSAVIGQLQTRDSLRMYNSLVERCFVDCVDTFYRRSLTKKEETCVRRCAEKFLRHSVLLGLSFAELNQGATSTD 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g1068 396 PANTHER TRNA-SPLICING ENDONUCLEASE SUBUNIT SEN54 15 261 IPR024337 -
Lele38g1068 396 Gene3D Mitochondrial import inner membrane translocase subunit tim13 like domains 310 394 IPR035427 -
Lele38g1068 396 SUPERFAMILY Tim10-like 331 391 IPR035427 -
Lele38g1068 396 MobiDBLite consensus disorder prediction 1 33 - -
Lele38g1068 396 Pfam tRNA-splicing endonuclease subunit sen54 N-term 50 98 IPR024336 -
Lele38g1068 396 Pfam Tim10/DDP family zinc finger 329 386 IPR004217 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g1068 Lele-ChrLele38 21995537 22000585 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele38g1068 38 21995537 22000585 Lele41g0167 41 1313756 1332820 CCT
Lele38g1068 38 21995537 22000585 Lele40g1005 40 20450584 20451998 hybridization