Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0924 ATGGCGTCAGCATCAATCTCTTTTTCAACACCTCAAATGGTGCAGACGTCACGAGACCCTGAGTTATTCTCATGTCTTATGATGGTGTTAAATTCTGATAGTAGTTCTATGATATTGTTTGAGGATAATCTTCCAAAGAATGCTGAACATTCTACGTGGTCCAGTATAGAGAAATTGGAAATAACCATGGTAAGCTTGAGAAGGCGCAGGCTTTTGGGACTATGCTCAGGGAACAGCTCCTTTGTCACTCCACTTCCTCTGTATTGTGAGAATTTAACTGCTTATGAACAATCAACTCAGCGTGCTAAACTTAAGAGCTCGAATCCCCTGGTCTCAGATGATACAAGCATCCTGGACAGTAATACCATTGTGAAAGAAGATCCAGGCTCATCGAATGCGTCTGGCTCTAGCTCATCAAAGGAGCAGCCCAGTGAACAAGTTTCAGGACCTCCTATCAAGCGCAGAAAGCGGCACAGGAGACAGAGTTCACATAATCAAGAAGCATGTCTCATGAGAGGTGTCTATTTCAAAAATATGAAATGGCAAGCAGCTATAAAGGTGGACAAGAAACAGATCCACCTGGGAACTGTTTGTTCACAGGAAGAGGCCGCTCACTTGTACGACAGGGCTGCTTTCATGTGTGGGAGGGAGCCAAACTTTGATCTCCCGGATGAAGAGAAGCGAGAACTGCGTAAATTCAAATGGGAAGAATTTCTTGCAATGACGAGGCAGGCGATAACCAGTAAAAAACACAAGAGAAGGGTCAGCCCAGGCTCACGCAGATCGGAGCTGCCTCCGTTGCAGAAACATGAATGGGACAGTAAGCAAGGAGGAGCAAGTGGATCCTCTGCTTATGAAGATGCAGAGCAAGAAGAGTTTATGAGAACGAAGAAAATGGTTGGTGAGGATCGAGGAACCCCAAATGGACAAGATACAACTTCTTCGCCTTCGTCGGTTTCATCGTCTTACGATTGGAAGAAGCGCGTTTTTATCCCAGCACTCGTAGCAGGGGTTGTTGGTTCTGGAACTGGGCTAGTTTCGAAGCATAGGAAAACCCTCGGACTTGCGAAGGTTTCTGCTAGCTATTCAGCTAATTTTGCCATTGTTACCGGTTGTTATTGTGGGGCACGTGAATTTGTGACTGCAACTAGAAAAACTGGGCCTGATGACCTATTGAACTCTGCAATAGCTGGATTTGGAACGGGTGCTGTTCTAGGTCGTCTGCAAGGAGGTCAAGTTGGTGCAGCTAAATACTCAGCCTTCTTTGCCATCGCGGGTACTGCAGCAGATTTTGCTTTTCTGAAACTGAAATCTATGTTGATAGACTACGATAAATCTGTGGATCAGGATGGTGAGAACTCACAGAAGACGAGCAGTAGCAGCTGGTTAAGATTGCCAGAGTGGTTCCCAATCCGAATACTTGATGAGGAAGCCCTTGCTGCAAAACGGGCTCAGGAAGAGAAGTTCCTTGCGCAGCAAGCTAGAATACGAAATCTGAGAAAAGAAGAGTCATGA 1515 0.4574 MASASISFSTPQMVQTSRDPELFSCLMMVLNSDSSSMILFEDNLPKNAEHSTWSSIEKLEITMVSLRRRRLLGLCSGNSSFVTPLPLYCENLTAYEQSTQRAKLKSSNPLVSDDTSILDSNTIVKEDPGSSNASGSSSSKEQPSEQVSGPPIKRRKRHRRQSSHNQEACLMRGVYFKNMKWQAAIKVDKKQIHLGTVCSQEEAAHLYDRAAFMCGREPNFDLPDEEKRELRKFKWEEFLAMTRQAITSKKHKRRVSPGSRRSELPPLQKHEWDSKQGGASGSSAYEDAEQEEFMRTKKMVGEDRGTPNGQDTTSSPSSVSSSYDWKKRVFIPALVAGVVGSGTGLVSKHRKTLGLAKVSASYSANFAIVTGCYCGAREFVTATRKTGPDDLLNSAIAGFGTGAVLGRLQGGQVGAAKYSAFFAIAGTAADFAFLKLKSMLIDYDKSVDQDGENSQKTSSSSWLRLPEWFPIRILDEEALAAKRAQEEKFLAQQARIRNLRKEES 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0924 504 Gene3D AP2/ERF domain 172 222 IPR036955 GO:0003700|GO:0006355
Lele40g0924 504 MobiDBLite consensus disorder prediction 105 146 - -
Lele40g0924 504 MobiDBLite consensus disorder prediction 306 321 - -
Lele40g0924 504 SMART rav1_2 170 227 IPR001471 GO:0003700|GO:0006355
Lele40g0924 504 MobiDBLite consensus disorder prediction 246 321 - -
Lele40g0924 504 MobiDBLite consensus disorder prediction 288 304 - -
Lele40g0924 504 PANTHER MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM22 297 490 IPR039175 GO:0042721|GO:0045039
Lele40g0924 504 Coils Coil 482 502 - -
Lele40g0924 504 MobiDBLite consensus disorder prediction 105 165 - -
Lele40g0924 504 SUPERFAMILY DNA-binding domain 171 215 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0924 Lele-ChrLele40 19799531 19810694 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele37g1105 37 20743251 20745764 Lele40g0924 40 19799531 19810694 hybridization
Lele38g0983 38 21413948 21421045 Lele40g0924 40 19799531 19810694 hybridization