Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0983 ATGGTAAGCTTGAGAAGACGCAGGCTTTTGGGACTATGCTCAGGGAACAGCTCCTTTGTCGCTCCACTTCCTCTGTATTGTGAGAATTTAACTGCTTATGAACAATCAACTCAGCGTGCTAAACTTAAGAGCTCGAATCCCATGGTCTCAGATGATACAAGCATCCTGGACAGTAATACCATTGTGAAAGAAGAACGAGGCTCATCGAATGCATCTGGCTCTAGCTCATCAAAGGAGCAGCCCAGTGAACAAGTTTCAGGACCTCCTATCAAGCGCAGAAAGCGGCACAGGAGAAAGAATTCACATAATCAAGAAGTATGTCTCATGAGAGGTGTCTATTTCAAAAATATGAAATGGCAAGCAGCTATAAAGGTGGACAAGAAACAGATCCACCTGGGAACTGTTAGTTCACAGGAAGAGGCCGCTCACTTGTATGACAGGGCTGCTTTCATGTGTGGGAGGGAGCCAAACTTTGAGCTCCCAGATGAAGAGAAGGGAGAACTGCGTAAATTCAAATGGGAAGAATTTCTTGCAATGACGAGGCAGGCGATAACCAGTAAAAAACACAAGAGAAGGGTCAGCCCAGGCTCACGCAGATCGGAGCTGCCTCCGGTGCAGAAACATGAATGGGACAGTAAGCAAGGAGGAGCAAGTGGATCCTCTGCTTATGAAGATGCAGAGCAAGAAGAGTTTATGAGAACGAAGAAAATGGTTGGTGAGGATCGAGGAACCCCAAATGGACAAGATACAACTTCTTCGCCTTCGTCGGTTTCATCGTCTTATGATTGGAAGAAGCGCATTTTTATCCCAGCACTCGTAGCAGGGGTTGTTGGTTCTGGAACTGGGCTAGTTTCGAAGCATCGGAAAACCCTCGGACTTGCGAAGGTTTCTGCTAGCTATTCAGCTAATTTTGCCATTGTTACCGGTTGCTATTGTGTGGCACGTGAATTTGTGACTGCAACTAGAAAAACTGGGCCTGATGACCTGTTGAACTCTGCAATAGCTGGATTTGGAACGGGTGCTGTTCTAGGTCGTCTGCAAGGAGGTCAAGTTGGTGCAGCTAAATACTCAGCCTTCTTTGCCATAGCGGGTACTGCAGCAGATTTTGCTTTTCTGAAACTGAAATCTATGTTGAGAGACTACGATAAATCTGTGGATCAGGATGGTGAGAACTCACAGAAGATGAGCAGTAGCAGCTGGTTAAGATTGCCAGAGTGGTTCCCAATCCGAATACTTGATGAGGAAGCCCTTGCTGCAAAACGGGCTCAGGAAGAGAAGTTCCTTGCGCAGCAAGCTAGAGTCCGAAATCTGAGAAAAGAAGAGTCATGA 1329 0.465 MVSLRRRRLLGLCSGNSSFVAPLPLYCENLTAYEQSTQRAKLKSSNPMVSDDTSILDSNTIVKEERGSSNASGSSSSKEQPSEQVSGPPIKRRKRHRRKNSHNQEVCLMRGVYFKNMKWQAAIKVDKKQIHLGTVSSQEEAAHLYDRAAFMCGREPNFELPDEEKGELRKFKWEEFLAMTRQAITSKKHKRRVSPGSRRSELPPVQKHEWDSKQGGASGSSAYEDAEQEEFMRTKKMVGEDRGTPNGQDTTSSPSSVSSSYDWKKRIFIPALVAGVVGSGTGLVSKHRKTLGLAKVSASYSANFAIVTGCYCVAREFVTATRKTGPDDLLNSAIAGFGTGAVLGRLQGGQVGAAKYSAFFAIAGTAADFAFLKLKSMLRDYDKSVDQDGENSQKMSSSSWLRLPEWFPIRILDEEALAAKRAQEEKFLAQQARVRNLRKEES 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0983 442 PANTHER MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM22 236 428 IPR039175 GO:0042721|GO:0045039
Lele38g0983 442 Gene3D AP2/ERF domain 110 160 IPR036955 GO:0003700|GO:0006355
Lele38g0983 442 MobiDBLite consensus disorder prediction 226 242 - -
Lele38g0983 442 MobiDBLite consensus disorder prediction 184 259 - -
Lele38g0983 442 Coils Coil 420 440 - -
Lele38g0983 442 MobiDBLite consensus disorder prediction 43 102 - -
Lele38g0983 442 SMART rav1_2 108 165 IPR001471 GO:0003700|GO:0006355
Lele38g0983 442 MobiDBLite consensus disorder prediction 244 259 - -
Lele38g0983 442 MobiDBLite consensus disorder prediction 43 84 - -
Lele38g0983 442 SUPERFAMILY DNA-binding domain 109 153 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0983 Lele-ChrLele38 21413948 21421045 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele38g0983 38 21413948 21421045 Lele39g0308 39 2112822 2115336 hybridization
Lele38g0983 38 21413948 21421045 Lele40g0924 40 19799531 19810694 hybridization