Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0799 ATGAGTGAACCACAGACTCAGCGTATGGATGCCGTGCCTTCGGAATCAGTCTCTGGCGCATCATCGTTGTCCGGTTCGCCCTCAAATGGTCTTGATCGGAGCTATTCTAACAATTCTTTGCAGAACGCTCGTCAAGATGCTGAAATTGAGTCTCCGGACTTATTGAAGAGCGAAGAGTATCGTCAGTTGTTTCGTCTTCCGCCGGAGGAAGTCCTCATTGAAGATTTTAACTGTGCCCTCCAGGAAAATATATTAATCCAGGGTCATATGTACCTGTTTGTAAACTTCATTTGTTTCTACTCAAACATATTCGGGTTTGAGACAAAGAGAGTAATCCCATTTGATGAAGTCACCTGTGTACGGAAGGCAAAGACAGCAGGACTCTTTCCTAATGCCATTGAAATTTTTGCTGGAAGCAAGAAGTACTTTTTTGCATCCTTTCTGTCCCGCGATGAAGCATTTAATATCATCAATGATGGGTGGCTGCAACATCGCAATGGTGCCAACGCCAGTACTGAGCAGCAGGAAGCAGTATCTGAGTCTAGCAGCCAAGAGAATGATGGATCTATAGCTATTGAAAAAGTGAACAGTTCTGAGATAGTAGAGAATGAATCACTTGCAACAAATCTGAGCAGAGATAATTCTAGCAAAGATGGCGAATCCATGGCAGTTCCAAAGGAGCAATCCAGTGTAGCAGTTGTTGCAGAAACTGTATCAAGCAATGCTGATTCAGGAGCTACCTGGAATTGGAAGGAAGAGAATATGGATGCTCCAAAAATACCGGAGGTTTATACAAATGTTGCAGAATCAAAGTTTCCGATAAAGGTAGAAGACTTCTTTAGGTACTTTTTATCAGATGAAGCCGTTACTTTTCAAGAGTCATTTCATAAAAAATGTGGAGATAAAGAGTTCGAGTGTACTTCATGGCATTCTCAAGAAGTTGGGTATACCCGGGAAAAGTCATTTCAACATCCAATAAAACTTTATCTTGGAGCGAAATTTGGTGGTTGTCATGAAGTTCAGACTCTCCGGATGTACAAGAACAGTCATGTGGTTTTAGAGACATCGCAAGAAGTCAGCAGCGTACCTTATGCAGATTATTTCCGTGTTGAGGGACGTTGGGATGTCGAGAGAGACAACAATGAATCAAAAGAGTGCTGCGTTTTGCGGGTTTATGTGAATGTGGCATTTTCGAAGAACACTATATGGAAAGGAAAAATAATACAGTCAACAATCGAAGAATGCCGAGAAGCTTATGCTACATGGATAAACATGGCTCATGCGTTGTTGAAGCAAAAGAACCTTGAAAAACAAGAAGAGAGCGCTCCTACTGCTAGCATAACGCAAACAAGCGAAGGAAATTTAGATAGTGAACAAAAAGCTGGAGGATCTTCAGAGAGTTCACAAGTGCCAAATAACCCAGTTGTTCAACCAGTTACCTCTGACATTGTTCATTCTAATCGCAACATTAACAACCAATTGCAAGGAAATTTGATCGACTCAACATATATTTCATGCATGTTACGAGATTGCGCGACAAAGTTCCGGTCTTGTTTAAAAAGTCAGAGCCATCTCTCTCTGTTCCTAGTTATCATTTTTGCTGTTATCTTCTTTATGCAGCAGTTTAGCATACTTATACTGTTGTCGAGGCCGCAACACATTCATGTGAGCCCTCCAACTGATTATATGAACAGCATAGAATATGGAGTGGGAAGAAGCCCTTCAGATATAGCTTGGTTAGAGAAAAGGATTCACTTCCTGAAAGATGAGATGTATATGGTTGAGACTAGGCTGGAGAGAATGAGGTACGAGCATGCCCTCTTGAAAAATCAACTCAAAGATCTTTAG 1848 0.4134 MSEPQTQRMDAVPSESVSGASSLSGSPSNGLDRSYSNNSLQNARQDAEIESPDLLKSEEYRQLFRLPPEEVLIEDFNCALQENILIQGHMYLFVNFICFYSNIFGFETKRVIPFDEVTCVRKAKTAGLFPNAIEIFAGSKKYFFASFLSRDEAFNIINDGWLQHRNGANASTEQQEAVSESSSQENDGSIAIEKVNSSEIVENESLATNLSRDNSSKDGESMAVPKEQSSVAVVAETVSSNADSGATWNWKEENMDAPKIPEVYTNVAESKFPIKVEDFFRYFLSDEAVTFQESFHKKCGDKEFECTSWHSQEVGYTREKSFQHPIKLYLGAKFGGCHEVQTLRMYKNSHVVLETSQEVSSVPYADYFRVEGRWDVERDNNESKECCVLRVYVNVAFSKNTIWKGKIIQSTIEECREAYATWINMAHALLKQKNLEKQEESAPTASITQTSEGNLDSEQKAGGSSESSQVPNNPVVQPVTSDIVHSNRNINNQLQGNLIDSTYISCMLRDCATKFRSCLKSQSHLSLFLVIIFAVIFFMQQFSILILLSRPQHIHVSPPTDYMNSIEYGVGRSPSDIAWLEKRIHFLKDEMYMVETRLERMRYEHALLKNQLKDL 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0799 615 Pfam VAD1 Analog of StAR-related lipid transfer domain 267 413 IPR031968 -
Lele40g0799 615 PANTHER PROTEIN VASCULAR ASSOCIATED DEATH 1, CHLOROPLASTIC 39 615 - -
Lele40g0799 615 ProSiteProfiles VASt domain profile. 263 434 IPR031968 -
Lele40g0799 615 MobiDBLite consensus disorder prediction 206 223 - -
Lele40g0799 615 Pfam GRAM domain 60 164 IPR004182 -
Lele40g0799 615 CDD PH-GRAM_GRAMDC 68 161 - -
Lele40g0799 615 FunFam GRAM domain containing 1B 56 164 - -
Lele40g0799 615 MobiDBLite consensus disorder prediction 1 42 - -
Lele40g0799 615 MobiDBLite consensus disorder prediction 206 229 - -
Lele40g0799 615 SMART gram2001c 58 124 IPR004182 -
Lele40g0799 615 MobiDBLite consensus disorder prediction 440 476 - -
Lele40g0799 615 Gene3D - 56 163 IPR011993 -
Lele40g0799 615 MobiDBLite consensus disorder prediction 169 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0799 Lele-ChrLele40 18474642 18483553 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele40g0799 40 18474642 18483553 Lele40g0799 40 18474642 18483553 ECH
Lele38g0848 38 20204564 20213433 Lele40g0799 40 18474642 18483553 hybridization