Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0848 ATGGCTGTCGCCGCCGCTGAAGCCGGCGGCATGAGTGAACCACAGACTCAGCGGATGGATGCCGCGCCTTCGGAATCAGTCTCTGGCGCATCATCGTTGTCCGGTTCGCCCTCAAATGGTCTTGATCGGAGCTATTCTAACAATTCTTTGCAGAACCCTAGTCAAGATACTGAAATTGAGTCTCCGGACTTATTGAAGAGCGAAGAGTATCGCCAGTTGTTTCGTCTTCCGCCGGAGGAAGTCCTTATTGAAGATTTTAACTGTGCCCTCCAGGAAAATATATTAATCCAGGGTCATATGTACCTGTTTGTAAACTTCATTTGTTTCTACTCAAACATATTCGGGTTTGAGACAAAGAGAGTAATCCCATTTGATGAAGTCACCTGTGTACGGAAGGCAAAGACAGCAGGACTCTTTCCTAATGCCATTGAAATTTTTGCTGGAAGCAAGAAGTACTTTTTTGCATCCTTTCTGTCCCGCGATGAAGCATTTAATATCATCAATGATGGGTGGCTGCAACATCGCAATGGTGCCAACGCCAGTACTGAGCAGCAGGGAGCAGTATCTGAGTCTAGCAGCCAAGAGAATGGATCTATAGCTATTGAAAAAGTGAACAGTTCTGAGATAGTAGACAATGAATCACTTGCAACCAATCTGAGCAAAGATAATTCTAGCAAAGATGGCGAATCCATGGCAGTTCCAAAGGAGCAATCCAGTGTAGCAGATGGTGCAGAAACTGTATCAAACAATGCTGATTCAGGAACTACCTGGAATTGGAAGGAAGAGAATATGGATGCTCCAAAAATACCGGAGGTTTATACAAATGTTGCAGAATCAAAGTTTCCGATAAAGGTAGAAGACTTCTTTAGGTACTTTTTATCAGACGAAGCCGTTACTTTTCAAGAGTCATTTCATAAAAAATGTGGAGATAAAGAGTTCGAGTGTACTTCATGGCATTCTCAAGAAGTTGGGTATACCCGTGAAAAGTCATTTCAACATCCAATAAAACTTTATCTTGGAGCGAAATTTGGTGGTTGTCATGAAGTTCAGACTCTCCGAATGTACAAGAACAGTCATGTGGTTTTAGAGACATCGCAAGAAGTCAGCAGCGTACCTTATGCAGATTATTTCCGTGTTGAGGGACGTTGGGATGTCGAGAGAGACAACAATGAATCAAAAGAGTGCTGCGTTTTGCGGGTTTATGTGAATGTGGCATTTTCGAAGAACACTATATGGAAAGGCAAAATAATACAGTCAACAATCGAAGAATGCCGAGAAGCTTATGCTACATGGATAAACATGGCTCATGAGTTGTTGAAGCAAAAGAACCTTGAAAAACAAGAAGAGAGCGCTCCTACTGCTAGCATGACGCAAACAAGCGAAGAAAATTTAGGTAGTGAGCAAAAAGCTGGAGGATCTTCAGAGAGTTCACAAGTGCCAAATAACCCAGTTGTTCAACCAGTTACATCTGACATTGTTCATTCTAATCGCAACATTAACAACCAATTGCAAGGAAATTTGATCGACTCAACATATATTTCATGCATGTTACGAGATTGCGCGACAAAGTTCCGGTCTTGTTTAAAAAGTCAGAGCCATCTCTCTCTGTTCCTAGTTATCATTTTTGCTGTCATCTTCTTTATGCAGTTTAGCATACTTATACTGTTGTCGAGGCCGCAACACATTCATGTGAGCCCTCCAACAGATTATATGAACAGGATAGAATATGGACTGGGAAGAGGCCCTTCAGATATGGCTTGGTTAGAGAAAAGGATTCACTTCCTGAAAGATGAGATGTATATGGTTGAGACTAGGCTGGAGAGAATGAGGTACGAGCATGCCCTCTTGAAAAAACAACTCAAAGATCTTGAGCTTAATAAATAG 1884 0.4193 MAVAAAEAGGMSEPQTQRMDAAPSESVSGASSLSGSPSNGLDRSYSNNSLQNPSQDTEIESPDLLKSEEYRQLFRLPPEEVLIEDFNCALQENILIQGHMYLFVNFICFYSNIFGFETKRVIPFDEVTCVRKAKTAGLFPNAIEIFAGSKKYFFASFLSRDEAFNIINDGWLQHRNGANASTEQQGAVSESSSQENGSIAIEKVNSSEIVDNESLATNLSKDNSSKDGESMAVPKEQSSVADGAETVSNNADSGTTWNWKEENMDAPKIPEVYTNVAESKFPIKVEDFFRYFLSDEAVTFQESFHKKCGDKEFECTSWHSQEVGYTREKSFQHPIKLYLGAKFGGCHEVQTLRMYKNSHVVLETSQEVSSVPYADYFRVEGRWDVERDNNESKECCVLRVYVNVAFSKNTIWKGKIIQSTIEECREAYATWINMAHELLKQKNLEKQEESAPTASMTQTSEENLGSEQKAGGSSESSQVPNNPVVQPVTSDIVHSNRNINNQLQGNLIDSTYISCMLRDCATKFRSCLKSQSHLSLFLVIIFAVIFFMQFSILILLSRPQHIHVSPPTDYMNRIEYGLGRGPSDMAWLEKRIHFLKDEMYMVETRLERMRYEHALLKKQLKDLELNK 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0848 627 MobiDBLite consensus disorder prediction 215 262 - -
Lele38g0848 627 MobiDBLite consensus disorder prediction 1 62 - -
Lele38g0848 627 PANTHER PROTEIN VASCULAR ASSOCIATED DEATH 1, CHLOROPLASTIC 19 623 - -
Lele38g0848 627 MobiDBLite consensus disorder prediction 241 260 - -
Lele38g0848 627 Pfam VAD1 Analog of StAR-related lipid transfer domain 276 422 IPR031968 -
Lele38g0848 627 Gene3D - 66 173 IPR011993 -
Lele38g0848 627 Pfam GRAM domain 70 174 IPR004182 -
Lele38g0848 627 ProSiteProfiles VASt domain profile. 272 443 IPR031968 -
Lele38g0848 627 FunFam GRAM domain containing 1B 66 174 - -
Lele38g0848 627 MobiDBLite consensus disorder prediction 17 60 - -
Lele38g0848 627 MobiDBLite consensus disorder prediction 445 486 - -
Lele38g0848 627 CDD PH-GRAM_GRAMDC 78 171 - -
Lele38g0848 627 MobiDBLite consensus disorder prediction 448 486 - -
Lele38g0848 627 Coils Coil 606 626 - -
Lele38g0848 627 MobiDBLite consensus disorder prediction 215 232 - -
Lele38g0848 627 SMART gram2001c 68 134 IPR004182 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0848 Lele-ChrLele38 20204564 20213433 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele38g0848 38 20204564 20213433 Lele38g0848 38 20204564 20213433 ECH
Lele38g0848 38 20204564 20213433 Lele40g0799 40 18474642 18483553 hybridization