Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0567 ATGAATTTTATCAAAGTGAAGTTGAGAATACCTCAAAAAGCAGATGGACAGAAGAAGAGCGTAATATTAGAGGAGCCTTTGCCAGAACATGAGGAACCCAAGCCTGAGAACAATGGTGGTGGTGGTGGTGGTGGTGATCAGTGTAAATCAGCAAATTCAGATGCTGCAGCAGAAGCCGAGGATTATGACGAAGATTTTATCACCAATGAGGTAAAGAGGAGGCTGAAAGAATTGAGAAGAAACAGTTTCATGGTGTTGATTCCTGAAGAAGAAGAACAGTCATGCGAGGAAGATGATGAGGAAGGAGAAGGAGAGAAATGCTCTAATAATGAATGGAGGGATGTGGAAGCAGAAGGCCAACAATGGTGGCGCGGTTTTGATGCTGTGTTTGAAAAGTACTGTGAGAGAATGCTCTTCTTTGATCGTATGAGCACTAAGCAACTTAATGAAGCTGGCAAAGGCTCCCAGTGCCCTTCAACTCAGTCTCCTAGATCTGCATCGAAGAAACTGGCTTACCCACTTCGATGTCTTTCCTTGAAACAATTCGGGCAAACCAATGATGAAACCGAACATCTTCAACTACAGCCTCAAAACGATCCCTATCAGGATCTTGAGACAGCATATGTTGGTCAGGTATGCCTGACTTGGGAGGCGCTTCATTGTCAATACAATCAAATGTGTCAGAAGGTATCTTGGCAAGCCGAAAGTCCTATCTGTTACAACCACAGTGCTCAGCAGTTTCAACAGTTCCAGGTTCTGCTACAAAGATTCAATGAGAACGAACCTTTCGAGAAGGGTCTTAGAGCCGAAATTTATGCTCGCATGAGGAACACTTTACCTAAACTGCTTCATGTTCCTAATGTTCAAGGTTTAGATCAAGGATCAGAAGAAGATGATTCAGAAATGAGAGTTCTTGCTCCTGATCTTATCAGGGTAATGGAAAACTCTATACTCGCATTCAAACTTTTCCTGAAAAAGGACAAGCAAAAGCCGAGTGGAGCGATTAACCTTGTTGGAAATCAGAACCAGCTTACCGCTCATTTGCAACGAGTTCAGTCAAGTCTTGAGAAGAAAGCGATGAAACTGAAGGAATTGTGGAGAAAGAGAAAAGGTTGGAAGAAGTGGTATTGGCCTCAGAAGCAAGAGGAGATTCAGTTATTAATGGCTCTCATTGACGTCAAAGTTCTAGCAAGGGTCATGAGAATGGCAAGGATAACAAAAGAACAACTATTTTGGTGTGAAGAAAAGTTGAAGAAACTAAATGTGACACACAATAGGTTAGAGAGAGACCCATGTCCCATCCTCTTCCCCTGCTAA 1317 0.4267 MNFIKVKLRIPQKADGQKKSVILEEPLPEHEEPKPENNGGGGGGGDQCKSANSDAAAEAEDYDEDFITNEVKRRLKELRRNSFMVLIPEEEEQSCEEDDEEGEGEKCSNNEWRDVEAEGQQWWRGFDAVFEKYCERMLFFDRMSTKQLNEAGKGSQCPSTQSPRSASKKLAYPLRCLSLKQFGQTNDETEHLQLQPQNDPYQDLETAYVGQVCLTWEALHCQYNQMCQKVSWQAESPICYNHSAQQFQQFQVLLQRFNENEPFEKGLRAEIYARMRNTLPKLLHVPNVQGLDQGSEEDDSEMRVLAPDLIRVMENSILAFKLFLKKDKQKPSGAINLVGNQNQLTAHLQRVQSSLEKKAMKLKELWRKRKGWKKWYWPQKQEEIQLLMALIDVKVLARVMRMARITKEQLFWCEEKLKKLNVTHNRLERDPCPILFPC 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0567 438 MobiDBLite consensus disorder prediction 13 36 - -
Lele40g0567 438 MobiDBLite consensus disorder prediction 90 109 - -
Lele40g0567 438 PANTHER DNA LIGASE (DUF1666)-RELATED 31 438 - -
Lele40g0567 438 MobiDBLite consensus disorder prediction 13 64 - -
Lele40g0567 438 MobiDBLite consensus disorder prediction 90 105 - -
Lele40g0567 438 Pfam Protein of unknown function (DUF1666) 202 437 IPR012870 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0567 Lele-ChrLele40 4838571 4841171 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele40g0567 40 4838571 4841171 Lele40g0567 40 4838571 4841171 ECH
Lele37g0632 37 5291094 5303454 Lele40g0567 40 4838571 4841171 hybridization
Lele38g0598 38 5032002 5034451 Lele40g0567 40 4838571 4841171 hybridization