Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0563 ATGGCGGAGCCCAATACCGTACACTCGCCTCTCGTGACCTACTTTTCCATGTTATCTCTTCTCTCACTCTGTCCTCCATTCGTCATCCTACTATGGTTTACGATGACACAAGCAGATGGGTCTGTTTTACAGACTTGGGATTATTTGAAACAGAATGGGCTGCAAGGATTTCTTAACGTATGGCCCAGACCTACTGCTACGGCTTGGAAAATAATTGGCGCGTATGGTGCATTTGAAGCGGCACTTCAACTTGTTCTACCTGGTAAAAGGGTCGAGGGCCCCATATCTACTACTGGCAACCGACCTGTGTACAAGATGATGCAGTTTCTGGATTTCTGCTATGCAAATGGTGTGACAGCATATGTAGTGACATTGATTACTTATCTTGCGCTCTGGTGGTTTGGAATATTCAACCCAACCATTGTGTACGATCACTTGGGGGAGATATATTCAGCACTCATTTTTGGGAGTTTCGTTTTCTGTATTTTCTTGTACTTAAAAGGTATGGAGCTCTATCCCCGAATCGGGAAAACTTTTGACATAAAAGTTTTTACAAATTGCAGATTTGGAATGATGTCTTGGGCTGTTCTTGCACTGACTTATTGCATAAAGCAGGAAACTGGGAAAGTAGCTGACTCAATGCTTGTAAATACTGCATTAATGCTGGTGTATGTTAGCAAGTTTTTCTGGTGGGAAGCTGGATATTGGAACACAATGGATATTGCTCATGACCGAGCGGGTTTTTATATTTGTTGGGGCTGCTTGGTGTGGGTTCCATCTGTTTATACATCTCCTGGAATGTACCTTGTCAACCATCCTGTAAATCTTGGCACTCAGCTTGCAATCTTCATTCTTGTGGCTGGCATTCTCTGCATATACATCAACTATGATTGTGATAGGCAAAGGCAAGAATTTCGTCAGATGAATGGAAAATGCTTAGTCTGGGGAAAACCTCCATCAAAGATAGAGGCCTCCTATACCACCACTACTGGAGAAACGAAAACTAGCCTTCTTTTAACATCTGGGTGGTGGGGTTTAGCCCGTCATTTCCATTATGTCCCAGAAATAATTTCTGCTTTCTTTTGGACAGTTCCTGCTCTATTCAATCATTTTTTGCCTTACTTCTACGTCATATATCTTACCATCCTTCTCTTTGATCGAGCAAAAAGGGATGACGATCGGTGTAAATCCAAGTATGGCAAGTACTGGAAACTATATTGCAACAAGGTTAGTCAATGGTCATGGACTCATGGTTGCAATATGTGGCCAAGAAAATTGTTTGTACAAAATCGGGCATCTTCAATTTCTCTAGTTTCAGCTATTTCTCTCTATTCTCTGAGAAATAGTGAAGAGATGTCAGCTTATAACAATGTTTTGGGCGGGAAATTGAAGCTCAAGGGAAAGGCCTTGGATGTGAAGGCTGATGGAGTGAAGAAGAAAAAGAAGAGGAATAAGAAACAAGATCAGATATTAGAATCCACTGAAAATGAATTTTCGGCAGGTGGAAGTGCTGAACAAGCTAATGATCCTAATGATCAAGAGATTGATGATGTGAACAAATCGAGAGGGGAAGAGAAGACTCCTCATATTGATGATCTTCTTACACCTGCTGAGAAACGATACATAGAACAAAGAGAAAAACTTGATGTTCATAGATTGGCTAAGATTTCCAATAAATCTCATCGTGACAGAATTCAGGATTTCAATCAGTATTTGGCAAACATGAGCGAGCACTATGATATCCCCAAAGTTGGCCCGGGATGA 1764 0.4127 MAEPNTVHSPLVTYFSMLSLLSLCPPFVILLWFTMTQADGSVLQTWDYLKQNGLQGFLNVWPRPTATAWKIIGAYGAFEAALQLVLPGKRVEGPISTTGNRPVYKMMQFLDFCYANGVTAYVVTLITYLALWWFGIFNPTIVYDHLGEIYSALIFGSFVFCIFLYLKGMELYPRIGKTFDIKVFTNCRFGMMSWAVLALTYCIKQETGKVADSMLVNTALMLVYVSKFFWWEAGYWNTMDIAHDRAGFYICWGCLVWVPSVYTSPGMYLVNHPVNLGTQLAIFILVAGILCIYINYDCDRQRQEFRQMNGKCLVWGKPPSKIEASYTTTTGETKTSLLLTSGWWGLARHFHYVPEIISAFFWTVPALFNHFLPYFYVIYLTILLFDRAKRDDDRCKSKYGKYWKLYCNKVSQWSWTHGCNMWPRKLFVQNRASSISLVSAISLYSLRNSEEMSAYNNVLGGKLKLKGKALDVKADGVKKKKKRNKKQDQILESTENEFSAGGSAEQANDPNDQEIDDVNKSRGEEKTPHIDDLLTPAEKRYIEQREKLDVHRLAKISNKSHRDRIQDFNQYLANMSEHYDIPKVGPG 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0563 587 FunFam Putative 7-dehydrocholesterol reductase 209 414 - -
Lele40g0563 587 MobiDBLite consensus disorder prediction 513 538 - -
Lele40g0563 587 Coils Coil 477 497 - -
Lele40g0563 587 MobiDBLite consensus disorder prediction 493 509 - -
Lele40g0563 587 Pfam Ergosterol biosynthesis ERG4/ERG24 family 168 411 IPR001171 GO:0016020|GO:0016126|GO:0016628
Lele40g0563 587 MobiDBLite consensus disorder prediction 476 538 - -
Lele40g0563 587 ProSitePatterns Sterol reductase family signature 2. 383 406 IPR018083 GO:0016628
Lele40g0563 587 Gene3D - 212 415 - -
Lele40g0563 587 Pfam FAM32A 454 548 IPR013865 -
Lele40g0563 587 PANTHER DELTA(14)-STEROL REDUCTASE 5 411 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0563 Lele-ChrLele40 4783765 4795493 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele40g0563 1 410 Miscellaneous Gene Families AT1G50430 77.650 0.0 687
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele40g0563 40 4783765 4795493 Lele40g0563 40 4783765 4795493 ECH
Lele37g0629 37 5261380 5263785 Lele40g0563 40 4783765 4795493 hybridization
Lele38g0594 38 4995616 5006753 Lele40g0563 40 4783765 4795493 hybridization