Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0594 ATGGCGGAGTCCAATACCGTACACTCGCCTCTCGTGACCTACTTTTCCATGTTATCTCTTCTCTCACTTTGTCCTCCATTCGTCATCCTCCTATGGTTTACGATGACACAAGCAGACGGGTCTGTTTTACAGACTTGGGATTATTTGAAACAGAATGGGCTGCAAGGATTTCTTAACGTATGGCCCAGACCTACTGCTACGGCTTGGAAAATAATTGGCGCGTATGCTGCATTTGAAGCGACACTTCAACTTGTTCTACCTGGTAAAAGGGTCGAGGGCCCCATATCTCCTACTGGCAACCGACCAGTGTACAAGGCAAATGGTGTGGCAGCATATGTAGTGACATTGATTACTTATCTTGGGCTATGGTGGTTTGGAATATTCAACTCAACCATTGTGTACGATCACTTGGGGGAGATATATTCAGCACTCATTTTTGGGAGTTTTGTCTTCTGTATTTTCTTGTACTTAAAAGGCCATTTTGCACCATCTTCTACTGATTCCGGCTCATCGGGGAACATAATCATCGATTTTTACTGGGGTATGGAGCTCTATCCCCGAATCAGGAAAAATTTTGACATAAAAGTTTTTACAAATTGCAGATTTGGAATGATGTCTTGGGCTGTTCTTGCACTGACGTATTGCATAAAGCAGTATGAGGAAACTGGGAAAGTAGCTGACTCAATGCTTGTAAATACTGCATTAATGCTGGTGTATGTTAGCAAGTTTTTCTGGTGGGAAGCTGGATATTGGAACACAATGGATATTGCTCATGACCGAGCGGGTTTTTATATTTGTTGGGGCTGCTTGGTGTGGGTTCCATCTGTTTATACATCTCCTGGAATGTACCTTGTCAACCATCCTGTAAATCTTGGTACTCAGCTTGCAATCTTCATTCTTGTGGCTGGCATTCTCTGCATATACATCAACTATGATTGTGATAGGCAAAGGCAAGAATGTCGTCAGACGAATGGAAAATGCTTAGTTTGGGGAAAACCTCCATCAAAGATAGAGGCCTCCTATACCACCACTACTGGAGAAACAAAAACCAGTCTTCTTTTAACATCTGGGTGGTGGGGTTTAGCCCGTCATTTCCATTATGTCCCAGAAATACTTTCTGCTTTCTTTTGGACAGTTCCTGCTCTATTCAATCATTTTTTGCCTTACTTCTACGTCATATATCTTATCATCCTTCTCTTTGATCGAGCAAAAAGGGATGACGATCGGTGTAAATCCAAGTATGGTAAGTACTGGAAACTATATTGCAACAAGATGTCAGCTTATGACAATGTTTTGGGCGGGAAATTGAAGCTCAAGGGAAAGGCCTTGGATGTGAAGGCTGGTGGAACGAAGAAGAAAAAGAAGAAGAATAAGAAACAAGATCAGATATTAGAATCCACTGAAAATGAATTTTCGGCAGGTGGAAGTGCTGAACAAGCTAATGATCCTAATGATCAAGAGATTGATGATGTGAACAAATCGAGAGGGGAAGAGAAGGCTCCTCATATTGATGATCTTCTTACACCGGCTGAGAAACGATACATAGAACAAAGAGAAAAACTTGATGTTCATAGATTGGCTAAGATTTCCAATAAATCTCATCGTGACAGAATTCAGGATTTCAATCAGTATTTGGCAAACATGAGCGAGCACTATGATATCCCCAAAGTTGGCCCTGGATGA 1683 0.4165 MAESNTVHSPLVTYFSMLSLLSLCPPFVILLWFTMTQADGSVLQTWDYLKQNGLQGFLNVWPRPTATAWKIIGAYAAFEATLQLVLPGKRVEGPISPTGNRPVYKANGVAAYVVTLITYLGLWWFGIFNSTIVYDHLGEIYSALIFGSFVFCIFLYLKGHFAPSSTDSGSSGNIIIDFYWGMELYPRIRKNFDIKVFTNCRFGMMSWAVLALTYCIKQYEETGKVADSMLVNTALMLVYVSKFFWWEAGYWNTMDIAHDRAGFYICWGCLVWVPSVYTSPGMYLVNHPVNLGTQLAIFILVAGILCIYINYDCDRQRQECRQTNGKCLVWGKPPSKIEASYTTTTGETKTSLLLTSGWWGLARHFHYVPEILSAFFWTVPALFNHFLPYFYVIYLIILLFDRAKRDDDRCKSKYGKYWKLYCNKMSAYDNVLGGKLKLKGKALDVKAGGTKKKKKKNKKQDQILESTENEFSAGGSAEQANDPNDQEIDDVNKSRGEEKAPHIDDLLTPAEKRYIEQREKLDVHRLAKISNKSHRDRIQDFNQYLANMSEHYDIPKVGPG 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0594 560 MobiDBLite consensus disorder prediction 468 511 - -
Lele38g0594 560 ProSitePatterns Sterol reductase family signature 2. 398 421 IPR018083 GO:0016628
Lele38g0594 560 ProSitePatterns Sterol reductase family signature 1. 172 187 IPR018083 GO:0016628
Lele38g0594 560 Gene3D - 224 428 - -
Lele38g0594 560 Pfam Ergosterol biosynthesis ERG4/ERG24 family 41 425 IPR001171 GO:0016020|GO:0016126|GO:0016628
Lele38g0594 560 Pfam FAM32A 427 521 IPR013865 -
Lele38g0594 560 MobiDBLite consensus disorder prediction 468 482 - -
Lele38g0594 560 MobiDBLite consensus disorder prediction 486 511 - -
Lele38g0594 560 FunFam Putative 7-dehydrocholesterol reductase 224 431 - -
Lele38g0594 560 PANTHER DELTA(14)-STEROL REDUCTASE 6 426 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0594 Lele-ChrLele38 4995616 5006753 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g0594 1 425 Miscellaneous Gene Families AT1G50430 83.765 0.0 751
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele38g0594 38 4995616 5006753 Lele38g0594 38 4995616 5006753 ECH
Lele38g0594 38 4995616 5006753 Lele39g0797 39 17015253 17017442 hybridization
Lele38g0594 38 4995616 5006753 Lele40g0563 40 4783765 4795493 hybridization