Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0295 ATGTCAAAAACAGCGGGATCAATTGTTGAAGCTGCACTAAAAAGGGATCCTCATGAGGTTGAATTCATTCAGTCAGTCCAGGAAGCAGTTCATGCTCTTGAAAGAGTAATAGCCAAAAATTCACAATATGTCAGCATCATGGAGCGCTTGTTGGAACCAGAACGTATGATTGTTTTCAGAGTTCCGTGGGTTGATGATAGGGGTGAGACACATGTTAACCGTGGTTTTCGGGTACAATATAACCAGTCACTGGGTCCATGCAGGGGTGGTATTCGTTTTCATCCGTCAATGAATTTAAGTATTGCTAAGTTCCTTGGTTTTGAACAGACTTTAAAGAATGCCTTATCACCTTACAAATTAGGAGGGGCAGCTGGTGGAAGTGATTTTGATCCAAAAGGAAAAAGTGATAATGAGGTTATGCGCTTCTGCCAAAGCTATATGAATGAGATGTATCGTTACTTTGGTCCTGACAAGGACCTTCCATCGGAGGAGATGGGTGTTGGAACTCGAGAAATGGGATATCTTTTTGGACAGTATAGACGACTAGCTGGTCATTTTCAGGGAAGTTTTACAGGGCCGAGGATATTTTGGTCTGGCTCTAGTCTTCGAACTGAAGCTACTGGCTATGGTCTGGTTTTCTTTGCTCAGCTTATACTAGCTGACATGAATAAAGAACTCAAAGGATTAAGATGTGCCATAAGTGGTTCTGGAAAGATTGCATTGCATGTTTTAGAGAAGTTGATTGCTTATGGCGCTCTTCCCATCACAGTTTCAGATTCAAGAGGATATTTGGTTGACGAGGATGGATTTGATTACATGAAAGTATCTTTATTGAGAGATATCAAAGCTCAACAGAGGAGTTTGAGAGACTATTCAAAGACCTATGCTCGATCCAAATATTATGATGAAGCAAAACCCTGGAGCGAAAGGTGTGATATTGCATTTGCTTGTGCATCCCAGAATGAGATTGATCAGTCTGATGCAATCAATTTGGTTAATTCAGGATGCCGTATGCTAGTAGAAGGTTCAAGCATGCCCCGTACATCAGAAGCAGCTGATGTTCTGAGGAAAGCTAACGTTCTCATTGCTCCTGCAATGGCTGCTGGTGCAGGAGGGGTTGTGGCTGGAGAACTTGAATTAAATCATCAGTGCAATTTGATGCACTGGTCACCAGAGGATTTTGAATCTAAATTGCAGGAAGCAATGAAACAGACTTATCAGAGAGCTATCAAAGCTGCATCTGACTTTGGTTATCAAAAAGAAAGTCCCGAGGCTTTGGTACATGGAGCTGTGATATCTGCATTTCTGACCATTGCTCAAGCTATGACTGATCAAGGTTGTGTATAG 1347 0.4187 MSKTAGSIVEAALKRDPHEVEFIQSVQEAVHALERVIAKNSQYVSIMERLLEPERMIVFRVPWVDDRGETHVNRGFRVQYNQSLGPCRGGIRFHPSMNLSIAKFLGFEQTLKNALSPYKLGGAAGGSDFDPKGKSDNEVMRFCQSYMNEMYRYFGPDKDLPSEEMGVGTREMGYLFGQYRRLAGHFQGSFTGPRIFWSGSSLRTEATGYGLVFFAQLILADMNKELKGLRCAISGSGKIALHVLEKLIAYGALPITVSDSRGYLVDEDGFDYMKVSLLRDIKAQQRSLRDYSKTYARSKYYDEAKPWSERCDIAFACASQNEIDQSDAINLVNSGCRMLVEGSSMPRTSEAADVLRKANVLIAPAMAAGAGGVVAGELELNHQCNLMHWSPEDFESKLQEAMKQTYQRAIKAASDFGYQKESPEALVHGAVISAFLTIAQAMTDQGCV 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0295 448 Gene3D - 205 370 - -
Lele40g0295 448 Gene3D Glutamate Dehydrogenase, chain A, domain 3 376 448 - -
Lele40g0295 448 PANTHER NADP-SPECIFIC GLUTAMATE DEHYDROGENASE 1-RELATED 1 448 - -
Lele40g0295 448 PIRSF Glu_DH 20 448 IPR014362 GO:0016639
Lele40g0295 448 SUPERFAMILY Aminoacid dehydrogenase-like, N-terminal domain 8 192 IPR046346 -
Lele40g0295 448 Gene3D Leucine Dehydrogenase, chain A, domain 1 51 186 - -
Lele40g0295 448 PRINTS Glutamate/leucine/phenylalanine/valine dehydrogenase signature 231 251 IPR006095 GO:0006520|GO:0016491
Lele40g0295 448 PRINTS Glutamate/leucine/phenylalanine/valine dehydrogenase signature 189 211 IPR006095 GO:0006520|GO:0016491
Lele40g0295 448 PRINTS Glutamate/leucine/phenylalanine/valine dehydrogenase signature 368 379 IPR006095 GO:0006520|GO:0016491
Lele40g0295 448 PRINTS Glutamate/leucine/phenylalanine/valine dehydrogenase signature 110 124 IPR006095 GO:0006520|GO:0016491
Lele40g0295 448 FunFam NADP-specific glutamate dehydrogenase 7 50 - -
Lele40g0295 448 FunFam NADP-specific glutamate dehydrogenase 378 448 - -
Lele40g0295 448 FunFam Glutamate dehydrogenase 205 370 - -
Lele40g0295 448 Pfam Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 199 446 IPR006096 GO:0006520|GO:0016491
Lele40g0295 448 SMART ELFV_dehydrog_3 200 446 IPR006096 GO:0006520|GO:0016491
Lele40g0295 448 FunFam Glutamate dehydrogenase 51 186 - -
Lele40g0295 448 Gene3D Glutamate Dehydrogenase, chain A, domain 3 8 50 - -
Lele40g0295 448 Pfam Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 53 180 IPR006097 GO:0006520|GO:0016491
Lele40g0295 448 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 199 446 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0295 Lele-ChrLele40 2390818 2396655 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele40g0295 35 326 EF-hand Containing Proteins AT5G07440 28.767 8.18e-32 122
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele40g0295 40 2390818 2396655 Lele40g0295 40 2390818 2396655 ECH
Lele37g0332 37 2792979 2798790 Lele40g0295 40 2390818 2396655 hybridization
Lele38g0316 38 2499207 2506207 Lele40g0295 40 2390818 2396655 hybridization