Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0243 ATGATGCATTATCAAACAAGAGATATGGAAGTTGAACTCAACGAAATAACAACTTCTGGCAAAATAAGCCTCCTTTACGAGGCCGCATATAGTGGGGATGTGTCAATTCTGAATTCGTTGATACAACAATGTCCACATATCTTGCACAAAACTTCACAAACTGTTTTCGCTGAAACTCCTTTACACATATCATCTTTGCTTGGCCACCTTGAATTCACAGAGAAACTTGTCACTCACAAGCCTAATCTCGCCCTTGAGGTAGACTCCTCACGAATGACAGCTCTCCATGTGGCTTCTGCAGAGGGTCACATCCATATCGTGAAGGAGTTGCTTAAAGTTAACAATGAGACATGCTTGTTTCATGATGAGGAAGGAAGAATTCCTTTGCACTATGCAGCTATGAGAGGGAGAACAAAGGTTGTGCAAGAGTTGATAAAAGCAAAGCCTCAGTCTTTGAGTTTTTGTGACAATGGCAAAACTGTTTTTCACATGTGTGTCACATACAACCATATAGAGACTCTCAGAGCTTTGGTGGAATTGAAGTCTGCTATTTATAATGGCAAACTTGTAAATTTCACAAACCTTGATGATGCCGGAAACACCATTCTCCATTTAGCTATCATGTTGAAGCGAGTTGAGGTGGTAAGTTTTCTGCTATCAATTCCAGAAATAAGAGAAATATCAAACTTGAAGAATAAGATAGGCTTTACAGGCTATGATATCTTGGAACATAGTCCAAAAGACTTCAAAATTTGTAAAATACAACACATGTTGACAAATGCCGATAAAGAAGAATTTGAAACTGATCATCCATACCCACCACTCGCATCTACTGATGTGGTCCCTCCTCAGAATGACGGTCGTTGTATTAAGAACTTCAAGTGTATTGGAAGTTTTTTAATGAAAATTTTAAGATGGATTGGAGGTTTGTTGAGACATGAGGATGAATGGCTTAAAGAGATGAGAGGGAATCTGAGTATAGTGTCTACATTTATAGCAACTATAACCTTTCAAGGTTTGATTAATCCCCCCGGTGCCTTTATTCAACAAGGCATAGTATCTACAGAAGGTAGCAACTCATCAACTGGAGTCCTCAACTGCACCATGCTTGATGATAATCAACACTATTGTCCCGGAGAAGCTTTGGCTTCATCCACTCTTCCTGATGCTTTCAAGCCCTACTTAGTTTCCATTACGTTCTCATTTTTTTCATCACTTTGTGTCACCCTTTTGCTTGTAAGTGGAATATTTCCTATGAAGAATAAAGCTGTGATATGGCTGGCATCACTAGGCATGAAGGCAAAGGCATCATATCATGATATGAAAGATATTGAAATCGTGATATTGAGGCATCTGGAATCGCGATACATAGAAGCTGAAATCATGATCGTATCGCGATTCAGCAATAGATAA 1413 0.3907 MMHYQTRDMEVELNEITTSGKISLLYEAAYSGDVSILNSLIQQCPHILHKTSQTVFAETPLHISSLLGHLEFTEKLVTHKPNLALEVDSSRMTALHVASAEGHIHIVKELLKVNNETCLFHDEEGRIPLHYAAMRGRTKVVQELIKAKPQSLSFCDNGKTVFHMCVTYNHIETLRALVELKSAIYNGKLVNFTNLDDAGNTILHLAIMLKRVEVVSFLLSIPEIREISNLKNKIGFTGYDILEHSPKDFKICKIQHMLTNADKEEFETDHPYPPLASTDVVPPQNDGRCIKNFKCIGSFLMKILRWIGGLLRHEDEWLKEMRGNLSIVSTFIATITFQGLINPPGAFIQQGIVSTEGSNSSTGVLNCTMLDDNQHYCPGEALASSTLPDAFKPYLVSITFSFFSSLCVTLLLVSGIFPMKNKAVIWLASLGMKAKASYHDMKDIEIVILRHLESRYIEAEIMIVSRFSNR 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0243 470 PANTHER PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 22 420 - -
Lele40g0243 470 Pfam Domain of unknown function 316 422 IPR026961 -
Lele40g0243 470 Pfam Ankyrin repeats (3 copies) 25 112 IPR002110 GO:0005515
Lele40g0243 470 Pfam Ankyrin repeats (3 copies) 129 219 IPR002110 GO:0005515
Lele40g0243 470 Gene3D - 3 239 IPR036770 -
Lele40g0243 470 ProSiteProfiles Ankyrin repeat region circular profile. 124 146 - -
Lele40g0243 470 ProSiteProfiles Ankyrin repeat profile. 124 146 IPR002110 GO:0005515
Lele40g0243 470 SUPERFAMILY Ankyrin repeat 18 235 IPR036770 -
Lele40g0243 470 SMART ANK_2a 56 85 IPR002110 GO:0005515
Lele40g0243 470 SMART ANK_2a 20 50 IPR002110 GO:0005515
Lele40g0243 470 SMART ANK_2a 124 154 IPR002110 GO:0005515
Lele40g0243 470 SMART ANK_2a 90 119 IPR002110 GO:0005515
Lele40g0243 470 SMART ANK_2a 157 186 IPR002110 GO:0005515
Lele40g0243 470 SMART ANK_2a 198 229 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0243 Lele-ChrLele40 1923991 1927130 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele40g0243 32 363 Miscellaneous Gene Families AT4G10720 25.439 6.08e-27 110
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele38g0259 38 2071195 2073663 Lele40g0243 40 1923991 1927130 hybridization