Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0259 ATGGGAACTTCTCATCGTGAAGAGAACAGATTGATGAGCCTTGTTTATGAAGCATCACGCAGAGGATCTGTATCCACTTTGAACTCACTTTTACAACAAGAACCATTAATCCTCCTCAAAATCTCACAAAGCGGCTTCACTGAAACTCCTTTACACATATCAGCTTTGCTTGGCCATGTGGAATTCACCAAGGCACTTGTCACATACAATCCCAAACTAGCCATTGAGGTTGACTCTTCGCAGAACACGCCCCTCCACCTTGCTTCTGCAGAAGGCCACGTCGACATCGTGAAGGAATTGCTTAAAGTGAATAACAAGACATGCTTGTTTCCTAATGAAGAGGGCAAAATTCCTTTGCACTATGCAGTTATCAGGGGGAGAATAGAGGTTGTTAAAGAGTTGGTCAAAGCCAAGCCTGAGTCTCTGAGCTTTCTTGATAACAACGGAAACAGTGTTTTTCACTTGTGTATGATATACAATCATTTGGAGACTCTCAAAGGTTTGGTGGAATTGGAACTTGCCATTTCTGGGAAGCTTCTTAACTTCACGAGTTCTGATGGAGTTGGCAACACTGTTTTCCATTTAGCAGTCACGTCCAAGCAAGTTGAGACCATAAGGTACCTGCTATCAATCCCAAAAGTAATAGAAATGGCAAGCTTGAAGAACGATATGGGTCTCACTGCCTATGACCTCCTTAAACGTAGTCCAAAAGATTTCAAAACCCTAGAAATACAAGTCATGCTGATGGAATATTCTGGAATCAGAACTGAGGAAGAGAACGGAATATTCCACGTTCATTTACACTCGTCACCACCACTTGCAAGACCTCGAATTCGAAAGAAGAAGAGAAATTGCTTTATAAGAATCTTGAAATGGATTGGAGGTTGGTTCAGACACAAAGGTGACTGGATAGAAGAAATGAGAGGAAACCTGAGTTTAGTGTCCACTGTTATAGCCACCATAACGTTTCAATCATTAGTTAACCCACCTGGTGGCTTCATACAACATGGTTTATCTCAAGGCTCATCCATTGATGCCCTAAACTGCACCATCCTTTATAACAACGAATCTTATTGTCCTGGTGAAGCAGTTTCATCTTTTCTTTCCCATAATATGCTTCTGAAGTATATAATTTTCAATACCATCTCTTTCATTTCGTCGCTTAGCGTCACCCTCTTGCTTGTAAGTGGAGTTCCTCTGAAGAACAAAGCTTTGATATGGCTTCTATCCATAGGCATGTGTATCACTCTCACAACCCTAGCCCTTGCTTACTTATGTGCCCTTAGAATGGTGATGCCAGACCATATTTGGAATAATAAAGCAGCAAAGATCACCATTGAAGCTTCAGTTTTGGCCTGGACTGTATTGCTTTTGCTGATTATAGTGTTGATCACACTGCGCCTTATAATTTGGATCGTGAAGAAATTTGTCAGAGCTGTAAAAAGGCTGATCACATGTGGAATTAGGGAAAGTTGA 1476 0.4126 MGTSHREENRLMSLVYEASRRGSVSTLNSLLQQEPLILLKISQSGFTETPLHISALLGHVEFTKALVTYNPKLAIEVDSSQNTPLHLASAEGHVDIVKELLKVNNKTCLFPNEEGKIPLHYAVIRGRIEVVKELVKAKPESLSFLDNNGNSVFHLCMIYNHLETLKGLVELELAISGKLLNFTSSDGVGNTVFHLAVTSKQVETIRYLLSIPKVIEMASLKNDMGLTAYDLLKRSPKDFKTLEIQVMLMEYSGIRTEEENGIFHVHLHSSPPLARPRIRKKKRNCFIRILKWIGGWFRHKGDWIEEMRGNLSLVSTVIATITFQSLVNPPGGFIQHGLSQGSSIDALNCTILYNNESYCPGEAVSSFLSHNMLLKYIIFNTISFISSLSVTLLLVSGVPLKNKALIWLLSIGMCITLTTLALAYLCALRMVMPDHIWNNKAAKITIEASVLAWTVLLLLIIVLITLRLIIWIVKKFVRAVKRLITCGIRES 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0259 491 SUPERFAMILY Ankyrin repeat 16 234 IPR036770 -
Lele38g0259 491 Gene3D - 3 238 IPR036770 -
Lele38g0259 491 ProSiteProfiles Ankyrin repeat region circular profile. 114 136 - -
Lele38g0259 491 Pfam Domain of unknown function 302 429 IPR026961 -
Lele38g0259 491 ProSiteProfiles Ankyrin repeat profile. 114 136 IPR002110 GO:0005515
Lele38g0259 491 SMART ANK_2a 10 39 IPR002110 GO:0005515
Lele38g0259 491 SMART ANK_2a 114 144 IPR002110 GO:0005515
Lele38g0259 491 SMART ANK_2a 80 109 IPR002110 GO:0005515
Lele38g0259 491 SMART ANK_2a 188 217 IPR002110 GO:0005515
Lele38g0259 491 SMART ANK_2a 46 75 IPR002110 GO:0005515
Lele38g0259 491 SMART ANK_2a 148 177 IPR002110 GO:0005515
Lele38g0259 491 ProSiteProfiles Ankyrin repeat region circular profile. 80 102 - -
Lele38g0259 491 ProSiteProfiles Ankyrin repeat profile. 80 102 IPR002110 GO:0005515
Lele38g0259 491 Pfam Ankyrin repeats (3 copies) 112 170 IPR002110 GO:0005515
Lele38g0259 491 Pfam Ankyrin repeats (3 copies) 18 102 IPR002110 GO:0005515
Lele38g0259 491 PANTHER PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 13 466 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0259 Lele-ChrLele38 2071195 2073663 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g0259 18 472 Miscellaneous Gene Families AT5G15500 25.373 4.08e-33 129
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele38g0259 38 2071195 2073663 Lele40g0243 40 1923991 1927130 hybridization